RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 HOXC13P31276 330 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 PXNP49023 591 aaPredicted RBP11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 SMTNP53814 917 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TNK2Q07912 1038 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 RAD51AP2Q09MP3 1159 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 GRSF1Q12849 480 aaKnown RBP eCLIP11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 MCM6Q14566 821 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TERF2Q15554 542 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 VWA3BQ502W6 1294 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 ZCWPW2Q504Y3 356 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 RNF43Q68DV7 783 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 DSTYKQ6XUX3 929 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 GAREM2Q75VX8 874 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TRAPPC11Q7Z392 1133 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 PSMG2Q969U7 264 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 DNAJC19Q96DA6 116 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 ZBTB45Q96K62 511 aaPredicted RBP11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 CEP63Q96MT8 703 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 GCNAQ96QF7 691 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TMEM209Q96SK2 561 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 PLIN2Q99541 437 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TSG101Q99816 390 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 MKNK1Q9BUB5 465 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 PARD6BQ9BYG5 372 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TSGA10Q9BZW7 698 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 CRISPLD1Q9H336 500 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 TASP1Q9H6P5 420 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 PLEKHA5Q9HAU0 1116 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 ARFGAP3Q9NP61 516 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 VPS45Q9NRW7 570 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 RXFP3Q9NSD7 469 aa11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 RALYQ9UKM9 306 aaKnown RBP11.36□□□□□ -0.59
HNRNPU-227ENST00000640264 FRMD3A2A2Y4 597 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 MAP2K7O14733 419 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 CLDN3O15551 220 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 XPOTO43592 962 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 LRPAP1P30533 357 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 MPLP40238 635 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 VEPH1Q14D04 833 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 PLA2G2CQ5R387 149 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 OVOS1Q6IE37 1185 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 CAMKK1Q8N5S9 505 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 SYT2Q8N9I0 419 aaPredicted RBP11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 ATAD1Q8NBU5 361 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 ZC3H10Q96K80 434 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 NTPCRQ9BSD7 190 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 NDST4Q9H3R1 872 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 ANKZF1Q9H8Y5 726 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 KCND2Q9NZV8 630 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 MYO6Q9UM54 1294 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 ATG2BQ96BY7 2078 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 FAM208BQ5VWN6 2430 aa11.35□□□□□ -0.59
HNRNPU-227ENST00000640264 MYH11P35749 1972 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 FRYQ5TBA9 3013 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CTAGE15A4D2H0 777 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 MTMR11A4FU01 709 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 H0YCG3 227 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 ERLIN1O75477 346 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 PRAMEF12O95522 483 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 GNA14O95837 355 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CLTAP09496 248 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 PLA2G4BP0C869 781 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CTAGE8P0CG41 777 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CXCL8P10145 99 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 MAPTP10636 758 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TRIM21P19474 475 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TYMPP19971 482 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CYP3A5P20815 502 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CDC25CP30307 473 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TUFMP49411 452 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 VAV2P52735 878 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TAF12Q16514 161 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TMEM196Q5HYL7 178 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 PSAPL1Q6NUJ1 521 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 WDR93Q6P2C0 686 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 PKN3Q6P5Z2 889 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CTAGE6Q86UF2 777 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 CTAGE4Q8IX94 777 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TXLNBQ8N3L3 684 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 TMEM161BQ8NDZ6 487 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 SYN2Q92777 582 aaPredicted RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 BICD1Q96G01 975 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 SMOC1Q9H4F8 434 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 NHEJ1Q9H9Q4 299 aaPredicted RBP11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 GKN1Q9NS71 199 aa11.34□□□□□ -0.59
HNRNPU-227ENST00000640264 LARSQ9P2J5 1176 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms