RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 A1CFQ9NQ94 594 aaKnown RBP5.92□□□□□ -1.46
CCDC7-216ENST00000640058 PDGFCQ9NRA1 345 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 C1orf112Q9NSG2 853 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 H7C4K7 107 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 PPP6CO00743 305 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 CES2O00748 559 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 PRKCBP05771 671 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 CERS1P27544 350 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 ARHGAP25P42331 645 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 RENBPP51606 427 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 KLF9Q13886 244 aaPredicted RBP5.91□□□□□ -1.46
CCDC7-216ENST00000640058 RNASE12Q5GAN4 147 aaKnown RBP5.91□□□□□ -1.46
CCDC7-216ENST00000640058 C1QL2Q7Z5L3 287 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 NEK8Q86SG6 692 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 MICU3Q86XE3 530 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 TCEAL8Q8IYN2 117 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 RITA1Q96K30 269 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 ASB2Q96Q27 587 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 PPP1R9BQ96SB3 815 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 MMS19Q96T76 1030 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 THAP7Q9BT49 309 aaPredicted RBP5.91□□□□□ -1.46
CCDC7-216ENST00000640058 LPAR3Q9UBY5 353 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 TPCN1Q9ULQ1 816 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 L1RE1Q9UN81 338 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 CDY1Q9Y6F8 540 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 ZNF804BA4D1E1 1349 aa5.91□□□□□ -1.46
CCDC7-216ENST00000640058 TRIM43BA6NCK2 446 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 PYCARD-AS1I3L0S3 204 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 PSMD9O00233 223 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 TP73O15350 636 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 RGS10O43665 173 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 PSG6Q00889 435 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 CCNIQ14094 377 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 ETFDHQ16134 617 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 EPHA10Q5JZY3 1008 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 PPP4R4Q6NUP7 873 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 CATSPERGQ6ZRH7 1159 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 CCDC149Q6ZUS6 474 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 CNGA4Q8IV77 575 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 SCARB1Q8WTV0 552 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 TRIM43Q96BQ3 446 aaPredicted RBP5.9□□□□□ -1.46
CCDC7-216ENST00000640058 SUCLG2Q96I99 432 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 ZBTB45Q96K62 511 aaPredicted RBP5.9□□□□□ -1.46
CCDC7-216ENST00000640058 SEMA4CQ9C0C4 833 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 FAM204AQ9H8W3 233 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 HDAC9Q9UKV0 1011 aa5.9□□□□□ -1.46
CCDC7-216ENST00000640058 MBD3L4A6NDZ8 208 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-216ENST00000640058 MBD3L3A6NE82 208 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-216ENST00000640058 TUBB4AP04350 444 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 RPS16P62249 146 aaKnown RBP5.89□□□□□ -1.47
CCDC7-216ENST00000640058 NXNQ6DKJ4 435 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 ZNF425Q6IV72 752 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 SIRT6Q8N6T7 355 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 FAM156AQ8NDB6 213 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 SNX18Q96RF0 628 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
CCDC7-216ENST00000640058 AFF4Q9UHB7 1163 aaKnown RBP5.89□□□□□ -1.47
CCDC7-216ENST00000640058 TCEAL9Q9UHQ7 104 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 AMFRQ9UKV5 643 aa5.89□□□□□ -1.47
CCDC7-216ENST00000640058 DRG1Q9Y295 367 aaKnown RBP5.89□□□□□ -1.47
CCDC7-216ENST00000640058 LOC102723971A0A1B0GUV8 181 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 SMIM35A0A1B0GVV1 85 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 KCNU1A8MYU2 1149 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 H7C1Q1 480 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 TSPAN6O43657 245 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 MAP4K4O95819 1239 aaPredicted RBP5.88□□□□□ -1.47
CCDC7-216ENST00000640058 HGFP14210 728 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 KLRC1P26715 233 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 PRKAR1BP31321 381 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 GKP32189 559 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
CCDC7-216ENST00000640058 MTHFSP49914 203 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 BCAT1P54687 386 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 SSBP2P81877 361 aaPredicted RBP5.88□□□□□ -1.47
CCDC7-216ENST00000640058 CNGA2Q16280 664 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 INSCQ1MX18 579 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 CERKLQ49MI3 558 aaPredicted RBP5.88□□□□□ -1.47
CCDC7-216ENST00000640058 RNF220Q5VTB9 566 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 MIS18BP1Q6P0N0 1132 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 LRTOMTQ8WZ04 291 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 KLHL13Q9P2N7 655 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 OGDHLQ9ULD0 1010 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 USP22Q9UPT9 525 aa5.88□□□□□ -1.47
CCDC7-216ENST00000640058 VSTM5A8MXK1 200 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 POC1B-GALNT4F8VUJ3 575 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 RAB27BO00194 218 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 PMPCBO75439 489 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 CACNB3P54284 484 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 KRTAP10-11P60412 298 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 SUMO2P61956 95 aaKnown RBP5.87□□□□□ -1.47
CCDC7-216ENST00000640058 FMO1Q01740 532 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 STK3Q13188 491 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 GRM3Q14832 879 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 KIAA0753Q2KHM9 967 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 MYO1HQ8N1T3 1032 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 GALNT4Q8N4A0 578 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 C8orf58Q8NAV2 365 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 TSR2Q969E8 191 aaKnown RBP5.87□□□□□ -1.47
CCDC7-216ENST00000640058 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms