RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 FAM172BPA6NC97 362 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DDX3YO15523 660 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HEXIM1O94992 359 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DBTP11182 482 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SYN1P17600 705 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HOXC8P31273 242 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MAGEA11P43364 429 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 RASSF2P50749 326 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 RPP30P78346 268 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TKFCQ3LXA3 575 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ATAD3BQ5T9A4 648 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DENND2CQ68D51 928 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 EPM2AIP1Q7L775 607 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DPP9Q86TI2 863 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TTC29Q8NA56 475 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 RAB3IL1Q8TBN0 382 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 STMN2Q93045 179 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF669Q96BR6 464 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 EDC3Q96F86 508 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 AK8Q96MA6 479 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HEPHQ9BQS7 1158 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SAV1Q9H4B6 383 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DPEP3Q9H4B8 488 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TRPV4Q9HBA0 871 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 A0A1B0GWJ7 208 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM210A6NLX4 147 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HSF2BPO75031 334 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CLN5O75503 358 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 APOL3O95236 402 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 FNTBP49356 437 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HNMTP50135 292 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ARFIP2P53365 341 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ELF3P78545 371 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PPARDQ03181 441 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 LSAMPQ13449 338 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ATP13A4Q4VNC1 1196 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PPP1R26Q5T8A7 1209 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DBX2Q6ZNG2 339 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PMEPA1Q969W9 287 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CLIC6Q96NY7 704 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TTYH3Q9C0H2 523 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SLC6A15Q9H2J7 730 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PLGRKTQ9HBL7 147 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PNPLA8Q9NP80 782 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CHTOPQ9Y3Y2 248 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DTNAQ9Y4J8 743 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ATP6V1G2-DDX39BF2Z307 99 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 VAV1P15498 845 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ALDH4A1P30038 563 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ABATP80404 500 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ABCB5Q2M3G0 1257 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM16LQ309B1 348 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TOM1L2Q6ZVM7 507 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 AKAP1Q92667 903 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM43Q96BQ3 446 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 BCL7BQ9BQE9 202 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ACPTQ9BZG2 426 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 GGA3Q9NZ52 723 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 DCTN4Q9UJW0 460 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MPDZO75970 2070 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 WDR33Q9C0J8 1336 aaKnown RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 PNMA6FA0A0J9YX94 578 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 RAB19A4D1S5 217 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 H0Y858 1186 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 BET1O15155 118 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 CTNND1O60716 968 aaKnown RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 HARS2P49590 506 aaKnown RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 CLCN4P51793 760 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 ERVK-21P61565 698 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 CHRNEQ04844 493 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 GRIN1Q05586 938 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 SSX2Q16385 188 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 SPOCD1Q6ZMY3 1216 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 PEX26Q7Z412 305 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 NET1Q7Z628 596 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 TRPV1Q8NER1 839 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 TAMM41Q96BW9 452 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 MCRS1Q96EZ8 462 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM68Q96MH6 324 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 FAM111AQ96PZ2 611 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 WDR24Q96S15 920 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 CSRNP1Q96S65 589 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 GORASP2Q9H8Y8 452 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 UFSP2Q9NUQ7 469 aa4.46□□□□□ -1.69
SCN3A-209ENST00000639244 TRNAU1APQ9NX07 287 aaKnown RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.46□□□□□ -1.69
SCN3A-209ENST00000639244 SERTM1A2A2V5 107 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 PEX11AO75192 247 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 DHFRP00374 187 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 PTBP1P26599 531 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CAPZA2P47755 286 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 LRMPQ12912 555 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TPTE2Q6XPS3 522 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 LDHAL6AQ6ZMR3 332 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 NLRC3Q7RTR2 1065 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF654Q8IZM8 581 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 OPALINQ96PE5 141 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms