RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 SP100P23497 879 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 PTAFRP25105 342 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 KLRC1P26715 233 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 BSGP35613 385 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 GARSP41250 739 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 ATP5OP48047 213 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 HSD17B4P51659 736 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 LUMP51884 338 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 POLGP54098 1239 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 KRT17Q04695 432 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 EXOSC9Q06265 439 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 SCN1BQ07699 218 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 PPP3CAQ08209 521 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 FOXC1Q12948 553 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 BMPR2Q13873 1038 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CAMK1Q14012 370 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CRYMQ14894 314 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 RAB39AQ14964 217 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 MED22Q15528 200 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TRIM71Q2Q1W2 868 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CCDC40Q4G0X9 1142 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CAVIN4Q5BKX8 364 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 NHSL2Q5HYW2 709 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 RAP1GAP2Q684P5 730 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 RINT1Q6NUQ1 792 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 USP17L6PQ6QN14 398 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 UNQ6494/PRO21346Q6UXR6 183 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 GBP6Q6ZN66 633 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 OTOAQ7RTW8 1153 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 PLPPR4Q7Z2D5 763 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 ADGRG6Q86SQ4 1221 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 NLRP10Q86W26 655 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 MICU3Q86XE3 530 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 KRT73Q86Y46 540 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 DNAAF5Q86Y56 855 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 LYSMD2Q8IV50 215 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 SYCP3Q8IZU3 236 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 PCSK9Q8NBP7 692 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CCDC110Q8TBZ0 833 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 ZNF384Q8TF68 577 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 SLC22A17Q8WUG5 538 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CFHR4Q92496 578 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CPT1BQ92523 772 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TNPO1Q92973 898 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 OTUD5Q96G74 571 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 BORCS6Q96GS4 357 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TCTN2Q96GX1 697 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TMX3Q96JJ7 454 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 FER1L6-AS2Q96M78 137 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 ZNF830Q96NB3 372 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 GCNAQ96QF7 691 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CTAGE1Q96RT6 745 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 DMRTA2Q96SC8 542 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TXN2Q99757 166 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 UTP14AQ9BVJ6 771 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 SLC12A9Q9BXP2 914 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 DPH1Q9BZG8 443 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 REXO4Q9GZR2 422 aaKnown RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 DPH5Q9H2P9 285 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 CYP4F12Q9HCS2 524 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 NRIP3Q9NQ35 241 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 ZBTB40Q9NUA8 1239 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 MARCH4Q9P2E8 410 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 HECAQ9UBI9 543 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 KCND3Q9UK17 655 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 KCNH3Q9ULD8 1083 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 ATXN7L1Q9ULK2 861 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 DAPP1Q9UN19 280 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 COA3Q9Y2R0 106 aaPredicted RBP3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TMED5Q9Y3A6 229 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 JRKLQ9Y4A0 524 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 TRPV2Q9Y5S1 764 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 SQORQ9Y6N5 450 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 FPGT-TNNI3KV9GXZ4 949 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 SYNGAP1Q96PV0 1343 aa3.65□□□□□ -1.83
CHRNA4-220ENST00000637628 A0A087WZ62 844 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 GPR75-ASB3A0A0A6YYF3 556 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 A0A0G2JPF8 293 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 KRBA1A5PL33 1030 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 GPR89AB7ZAQ6 455 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 HNRNPCL3B7ZW38 293 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 PEX12O00623 359 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 PCDH17O14917 1159 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 SCAMP1O15126 338 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 TP73O15350 636 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 PRPF4O43172 522 aaKnown RBP eCLIP3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 SLC25A17O43808 307 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 RRP9O43818 475 aaKnown RBP3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 NPHS1O60500 1241 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 RGS9O75916 674 aaPredicted RBP3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 MATN4O95460 622 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 DLGAP3O95886 979 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 INHBAP08476 426 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 CELA3BP08861 270 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 FTH1P19P0C7X4 201 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 GPR89BP0CG08 455 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 HNRNPCL4P0DMR1 293 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 RARGP13631 454 aa3.64□□□□□ -1.83
CHRNA4-220ENST00000637628 ALADP13716 330 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms