RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SDCBP2Q9H190 292 aa20.12■□□□□ 0.81
CLN6-221ENST00000637494 CYP3A43Q9HB55 503 aa20.12■□□□□ 0.81
CLN6-221ENST00000637494 TMEM8AQ9HCN3 771 aa20.12■□□□□ 0.81
CLN6-221ENST00000637494 WNT6Q9Y6F9 365 aa20.12■□□□□ 0.81
CLN6-221ENST00000637494 CACNA1IQ9P0X4 2223 aa20.12■□□□□ 0.81
CLN6-221ENST00000637494 FANCMQ8IYD8 2048 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 SLC9A3R1O14745 358 aaPredicted RBP20.11■□□□□ 0.81
CLN6-221ENST00000637494 LILRB5O75023 590 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 GTF2H1P32780 548 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 CACNA2D1P54289 1103 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 SLC7A9P82251 487 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 TMEM196Q5HYL7 178 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 ZNF658Q5TYW1 1059 aaPredicted RBP20.11■□□□□ 0.81
CLN6-221ENST00000637494 KRT39Q6A163 491 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 SPOPLQ6IQ16 392 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 Q6ZS52 159 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 SMYD4Q8IYR2 804 aaPredicted RBP20.11■□□□□ 0.81
CLN6-221ENST00000637494 CRYBG2Q8N1P7 616 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 SUMF1Q8NBK3 374 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 KCNK16Q96T55 309 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 EPC1Q9H2F5 836 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 KRT82Q9NSB4 513 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 SMG5Q9UPR3 1016 aaKnown RBP20.11■□□□□ 0.81
CLN6-221ENST00000637494 GREB1Q4ZG55 1949 aa20.11■□□□□ 0.81
CLN6-221ENST00000637494 LEFTY2O00292 366 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 PAPSS2O95340 614 aaPredicted RBP20.1■□□□□ 0.81
CLN6-221ENST00000637494 FAM200BP0CF97 657 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 MBL2P11226 248 aaPredicted RBP20.1■□□□□ 0.81
CLN6-221ENST00000637494 GJA4P35212 333 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 ASPAP45381 313 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 STIM1Q13586 685 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 GAS6Q14393 721 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 EML3Q32P44 896 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 FBXO43Q4G163 708 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 ZCWPW2Q504Y3 356 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 C1orf220Q5T0J3 134 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 KIAA1958Q8N8K9 716 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 CCDC26Q8TAB7 109 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 RIN3Q8TB24 985 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 NT5C1AQ9BXI3 368 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 NIF3L1Q9GZT8 377 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 FBXO44Q9H4M3 255 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.1■□□□□ 0.815e-7■■■■■ 90.8
CLN6-221ENST00000637494 GMEB2Q9UKD1 530 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 CPQQ9Y646 472 aa20.1■□□□□ 0.81
CLN6-221ENST00000637494 OTOL1A6NHN0 477 aaPredicted RBP20.09■□□□□ 0.81
CLN6-221ENST00000637494 TDGF1P13385 188 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 CCDC130P13994 396 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 CNR2P34972 360 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 SLC5A3P53794 718 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 PPP3CAQ08209 521 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 WDR44Q5JSH3 913 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 HECTD3Q5T447 861 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 LONP2Q86WA8 852 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 FUKQ8N0W3 1084 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 TTC39CQ8N584 583 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 GPR161Q8N6U8 529 aaKnown RBP20.09■□□□□ 0.81
CLN6-221ENST00000637494 SLC2A14Q8TDB8 520 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 TAS1R2Q8TE23 839 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 CD101Q93033 1021 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 TIGD1Q96MW7 591 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 NACA2Q9H009 215 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 FAM49BQ9NUQ9 324 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 SLC8A2Q9UPR5 921 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 USP34Q70CQ2 3546 aa20.09■□□□□ 0.81
CLN6-221ENST00000637494 F5P12259 2224 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 ANAPC1Q9H1A4 1944 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 OAS1P00973 400 aaKnown RBP20.08■□□□□ 0.81
CLN6-221ENST00000637494 ADORA2BP29275 332 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 PRCPP42785 496 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 MXI1P50539 228 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 GALK1P51570 392 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 INCA1Q0VD86 236 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 ORC1Q13415 861 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 COBLL1Q53SF7 1204 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 TCERG1LQ5VWI1 586 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 FSTL4Q6MZW2 842 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 PAQR9Q6ZVX9 377 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 KIAA2013Q8IYS2 634 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 RNF38Q9H0F5 515 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 TMEM30AQ9NV96 361 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 SMPD4Q9NXE4 827 aa20.08■□□□□ 0.81
CLN6-221ENST00000637494 CHORDC1Q9UHD1 332 aaPredicted RBP20.08■□□□□ 0.81
CLN6-221ENST00000637494 HELZP42694 1942 aaKnown RBP20.08■□□□□ 0.8
CLN6-221ENST00000637494 CHURC1-FNTBB4DL54 471 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 SLC16A3O15427 465 aaKnown RBP20.07■□□□□ 0.8
CLN6-221ENST00000637494 OLFM2O95897 454 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 CD58P19256 250 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 PPP1R2P41236 205 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 FNTBP49356 437 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 MAP3K7CLP57077 242 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 FKBP3Q00688 224 aaKnown RBP20.07■□□□□ 0.8
CLN6-221ENST00000637494 HEATR6Q6AI08 1181 aaKnown RBP20.07■□□□□ 0.8
CLN6-221ENST00000637494 PRR23BQ6ZRT6 265 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 FBXL13Q8NEE6 735 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 ENGASEQ8NFI3 743 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 SCAMP5Q8TAC9 235 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 CHFRQ96EP1 664 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 CYFIP2Q96F07 1278 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 FAXDC2Q96IV6 333 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms