RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CEP83Q9Y592 693 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 GREB1Q4ZG55 1949 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 NOTCH4Q99466 2003 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 GRXCR2A6NFK2 248 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 LSM8O95777 96 aaKnown RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 RHOP08100 348 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 HNRNPH3P31942 346 aaKnown RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 MRE11P49959 708 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 EPHA5P54756 1037 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 USP46P62068 366 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 NTHL1P78549 312 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 GOLGA8FQ08AF8 430 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 GOLGA8DPQ0D2H9 430 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 PABPC1LQ4VXU2 614 aaKnown RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 TJAP1Q5JTD0 557 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 ATAT1Q5SQI0 421 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 PMF1Q6P1K2 205 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 DRC7Q8IY82 874 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 LEMD2Q8NC56 503 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 SCAMP5Q8TAC9 235 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 STK32AQ8WU08 396 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 SUSD6Q92537 303 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 TRMT2BQ96GJ1 504 aaKnown RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 MYRFLQ96LU7 910 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 AGPAT1Q99943 283 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 SYT11Q9BT88 431 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 COMMD8Q9NX08 183 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 IL37Q9NZH6 218 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 EHD2Q9NZN4 543 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 CYTH4Q9UIA0 394 aa16.88■□□□□ 0.29
CLN6-216ENST00000636876 MAGED2Q9UNF1 606 aaPredicted RBP16.88■□□□□ 0.29
CLN6-216ENST00000636876 C5orf42Q9H799 3197 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 MBTPS2O43462 519 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 SKILP12757 684 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 CDH5P33151 784 aaPredicted RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 RGS7P49802 495 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 KIF11P52732 1056 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 ADKP55263 362 aaKnown RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 GSE1Q14687 1217 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 RAB41Q5JT25 222 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 HGSNATQ68CP4 663 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 TRIM72Q6ZMU5 477 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 ZNF571Q7Z3V5 609 aaPredicted RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 WDTC1Q8N5D0 677 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 TMEM35BQ8NCS4 154 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 KCTD13Q8WZ19 329 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 HSFY1Q96LI6 401 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 HAUS4Q9H6D7 363 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 IL21Q9HBE4 155 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 WDR6Q9NNW5 1121 aaKnown RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 UXTQ9UBK9 157 aaPredicted RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
CLN6-216ENST00000636876 BDP1A6H8Y1 2624 aa16.87■□□□□ 0.29
CLN6-216ENST00000636876 ZNF638Q14966 1978 aaKnown RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 FAM92AA1XBS5 289 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 GABBR2O75899 941 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 FGF19O95750 216 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 SERPING1P05155 500 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 MYL4P12829 197 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 YWHAQP27348 245 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 RPL34P49207 117 aaKnown RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 NOMO3P69849 1222 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 TFF2Q03403 129 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 IFRD2Q12894 506 aaPredicted RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 PDCLQ13371 301 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 TSR1Q2NL82 804 aaKnown RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 CYP4A22Q5TCH4 519 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 OLIG1Q8TAK6 271 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 NECTIN4Q96NY8 510 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 PCDHB18PQ96TA0 734 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 SLC4A5Q9BY07 1137 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 FBXO44Q9H4M3 255 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 LRRC4Q9HBW1 653 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 CYLDQ9NQC7 956 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 ABHD10Q9NUJ1 306 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 ZNHIT6Q9NWK9 470 aaKnown RBP16.86■□□□□ 0.29
CLN6-216ENST00000636876 THEGQ9P2T0 379 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 USP3Q9Y6I4 520 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 CLUHO75153 1309 aa16.86■□□□□ 0.29
CLN6-216ENST00000636876 ZNF197O14709 1029 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 F11P03951 625 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 CYP1A1P04798 512 aaPredicted RBP16.85■□□□□ 0.29
CLN6-216ENST00000636876 TNFAIP3P21580 790 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 GABRR2P28476 465 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 CDC25CP30307 473 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 CCR2P41597 374 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 ACADSBP45954 432 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 TKTL1P51854 596 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 ADIGQ0VDE8 80 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 TAF10Q12962 218 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms