RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 LRMDAQ9H2I8 198 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 FAM49BQ9NUQ9 324 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 MAGED2Q9UNF1 606 aaPredicted RBP14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 DRG1Q9Y295 367 aaKnown RBP14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 LOXHD1Q8IVV2 1947 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 TRIM49D1C9J1S8 452 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 MYL2P10916 166 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 PDGFRAP16234 1089 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 ARFIP2P53365 341 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 ATXN1P54253 815 aaKnown RBP14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 CRADDP78560 199 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 CCDC6Q16204 474 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 XYLT1Q86Y38 959 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 UNC5BQ8IZJ1 945 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 AGGF1Q8N302 714 aaeCLIP14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 ARMC2Q8NEN0 867 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 FBXO27Q8NI29 283 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 TRPM4Q8TD43 1214 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 TMEM120AQ9BXJ8 343 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 YIPF3Q9GZM5 350 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 ELOVL4Q9GZR5 314 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 IQCGQ9H095 443 aaKnown RBP14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 IL1RAPL1Q9NZN1 696 aa14.66□□□□□ -0.06
CACNA1A-228ENST00000636610 ZNF646O15015 1829 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 FAM189A1O60320 539 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 ACVR2BQ13705 512 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 MROH9Q5TGP6 573 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 ANKRD36BP1Q96IX9 119 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 CEP41Q9BYV8 373 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 ACSS3Q9H6R3 686 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 RNPEPL1Q9HAU8 725 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 AS3MTQ9HBK9 375 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 DDX56Q9NY93 547 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 NFASCO94856 1347 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 ENO4A6NNW6 628 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 KRT36O76013 467 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 MICAL2O94851 1124 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 EIF4BP23588 611 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 GRIA1P42261 906 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 PTDSS1P48651 473 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 KDSRQ06136 332 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 KPNB1Q14974 876 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 TRNP1Q6NT89 227 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 XRRA1Q6P2D8 792 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 RPAINQ86UA6 219 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 ZBTB8OSQ8IWT0 167 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 FBXO16Q8IX29 292 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 VPS52Q8N1B4 723 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 CLPTM1LQ96KA5 538 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 CADM1Q9BY67 442 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 B3GNT5Q9BYG0 378 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 SHCBP1LQ9BZQ2 653 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 GGA3Q9NZ52 723 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 SIX4Q9UIU6 781 aa14.65□□□□□ -0.06
CACNA1A-228ENST00000636610 SOWAHBA6NEL2 793 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 SIGLEC16A6NMB1 481 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 GPR25O00155 361 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 HCRTO43612 131 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 HAUS5O94927 633 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 KRT7P08729 469 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 RBL1P28749 1068 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 POLR2BP30876 1174 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 ROR1Q01973 937 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 KRT81Q14533 505 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 JADE1Q6IE81 842 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 BANPQ8N9N5 519 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 MCUR1Q96AQ8 359 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 NAF1Q96HR8 494 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 TRIM55Q9BYV6 548 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 CXCL16Q9H2A7 254 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 PIM2Q9P1W9 311 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 SLC24A2Q9UI40 661 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 CPSF3Q9UKF6 684 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 SYNJ2BP-COX16A0A087WUM0 186 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 LACTBL1A8MY62 500 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 GYG2O15488 501 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 HMGCRP04035 888 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 TPBGLP0DKB5 382 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 TFE3P19532 575 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 GCKP35557 465 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 PHKA2P46019 1235 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 ZNF200P98182 395 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 CA9Q16790 459 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 DCAF15Q66K64 600 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 MAP1SQ66K74 1059 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 ADGRD1Q6QNK2 874 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 BBS12Q6ZW61 710 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 SCUBE3Q8IX30 993 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 UBR7Q8N806 425 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 RXFP2Q8WXD0 754 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 TRIM6Q9C030 488 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 DONSONQ9NYP3 566 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms