RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PRKAG1P54619 331 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM84BQ96KN1 310 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 FBXO28Q9NVF7 368 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 KLHL3Q9UH77 587 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 TAF6P49848 677 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 LINC00116Q8NCU8 138 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 STMN3Q9NZ72 180 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 KYAT1Q16773 422 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 PPM1LQ5SGD2 360 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 IQCF2Q8IXL9 164 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 DPP10Q8N608 796 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 THG1LQ9NWX6 298 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 ENO4A6NNW6 628 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 KLC1Q07866 573 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 ZNHIT2Q9UHR6 403 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 NCKAP1Q9Y2A7 1128 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 USP20Q9Y2K6 914 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 FLT1P17948 1338 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 FAM171A1Q5VUB5 890 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 GLMNQ92990 594 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 PLA2G6O60733 806 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 EIF2B5Q13144 721 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 PRPF18Q99633 342 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 TP73O15350 636 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 RRM2P31350 389 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 HNF4AP41235 474 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 PLEKHH3Q7Z736 793 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 STK33Q9BYT3 514 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 ABCG8Q9H221 673 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 SNTG2Q9NY99 539 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 AKAP7Q9P0M2 348 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 KLHL20Q9Y2M5 609 aa18.45■□□□□ 0.54
CACNA1A-227ENST00000636549 FOSL2P15408 326 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 TPH1P17752 444 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 SERPINB10P48595 397 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 CCL23P55773 120 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 ISLR2Q6UXK2 745 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 DAGLAQ9Y4D2 1042 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 KPNA3O00505 521 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 OPLAHO14841 1288 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 GHRP10912 638 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 TGM2P21980 687 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 ITGA3P26006 1051 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 XKR3Q5GH77 459 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 SH2D3CQ8N5H7 860 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 EIF3LQ9Y262 564 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 TBC1D3BA6NDS4 549 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 EPHA7Q15375 998 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 PLA2G4EQ3MJ16 856 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 SCN3BQ9NY72 215 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 PRKAG3Q9UGI9 489 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 PSMD3O43242 534 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 ALDH2P05091 517 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 ADSLP30566 484 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 COX10Q12887 443 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 ARL6IP4Q66PJ3 421 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 LRRC8BQ6P9F7 803 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 NLRP14Q86W24 1093 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 OR10G6Q8NH81 332 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 USP27XA6NNY8 438 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 AP3D1O14617 1153 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 CST8O60676 142 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 CHN1P15882 459 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 TOB2Q14106 344 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 MICU2Q8IYU8 434 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 MAPK10P53779 464 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 TTC39BQ5VTQ0 682 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 HERC6Q8IVU3 1022 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 JSRP1Q96MG2 331 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 PRRG4Q9BZD6 226 aa18.44■□□□□ 0.54
CACNA1A-227ENST00000636549 GMNCA6NCL1 334 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 MIF4GDA9UHW6 222 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 PPP1R26Q5T8A7 1209 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 UTP15Q8TED0 518 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 ABCG4Q9H172 646 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 CYLDQ9NQC7 956 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 BEX3Q00994 111 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 RBM15Q96T37 977 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 SPATA2Q9UM82 520 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 KIF24Q5T7B8 1368 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 CYP2C19P33261 490 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 TAP1Q03518 808 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 MYO1HQ8N1T3 1032 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 ATP6V1C2Q8NEY4 427 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 LBPP18428 481 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 GRK4P32298 578 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 CAV1Q03135 178 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 PTGISQ16647 500 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 PRAMEF19Q5SWL8 479 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms