RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 FAM237AA0A1B0GTK4 181 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 ZNF840PA6NDX5 716 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 CLDN5O00501 218 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 PRR29P0C7W0 189 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 TCF3P15923 654 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 GJA4P35212 333 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 VAMP7P51809 220 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 LPAL2Q16609 132 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 ZACNQ401N2 412 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 LAIR1Q6GTX8 287 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 FSTL4Q6MZW2 842 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 INTS8Q75QN2 995 aaKnown RBP19.04■□□□□ 0.64
PNKP-225ENST00000636214 ERMP1Q7Z2K6 904 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 FAM35AQ86V20 835 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 RIN3Q8TB24 985 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 CD101Q93033 1021 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 DMAP1Q9NPF5 467 aaPredicted RBP19.04■□□□□ 0.64
PNKP-225ENST00000636214 NME7Q9Y5B8 376 aa19.04■□□□□ 0.64
PNKP-225ENST00000636214 OTOL1A6NHN0 477 aaPredicted RBP19.03■□□□□ 0.64
PNKP-225ENST00000636214 LEFTY2O00292 366 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 SLC9A3R1O14745 358 aaPredicted RBP19.03■□□□□ 0.64
PNKP-225ENST00000636214 MAPK13O15264 365 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 RNF40O75150 1001 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 AP1G2O75843 785 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 ZNF202O95125 648 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 VNN1O95497 513 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 MBL2P11226 248 aaPredicted RBP19.03■□□□□ 0.64
PNKP-225ENST00000636214 DLG4P78352 724 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 DPYDQ12882 1025 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 EML3Q32P44 896 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 SV2AQ7L0J3 742 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 FAM186BQ8IYM0 893 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 OVCA2Q8WZ82 227 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 MAPK8IP1Q9UQF2 711 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 CPQQ9Y646 472 aa19.03■□□□□ 0.64
PNKP-225ENST00000636214 DMXL1Q9Y485 3027 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 K7ESF4 209 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 EGFP01133 1207 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 HLA-DRAP01903 254 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 SDHBP21912 280 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 PSMC2P35998 433 aaKnown RBP19.02■□□□□ 0.64
PNKP-225ENST00000636214 GALK1P51570 392 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 CACNA2D1P54289 1103 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 SLC7A9P82251 487 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 LMNB2Q03252 620 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 ADAM9Q13443 819 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 NFIL3Q16649 462 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 WDR44Q5JSH3 913 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 ACOT1Q86TX2 421 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 UNC93AQ86WB7 457 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 GUF1Q8N442 669 aaKnown RBP19.02■□□□□ 0.64
PNKP-225ENST00000636214 ACDQ96AP0 544 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 CHFRQ96EP1 664 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 NACA2Q9H009 215 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 MMRN2Q9H8L6 949 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 GDPD2Q9HCC8 539 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 KRT82Q9NSB4 513 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 SMPD4Q9NXE4 827 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 SPAG17Q6Q759 2223 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 SDK1Q7Z5N4 2213 aa19.02■□□□□ 0.64
PNKP-225ENST00000636214 RALGAPA1Q6GYQ0 2036 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 HOXA6P31267 233 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 NDST1P52848 882 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 SLC5A3P53794 718 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 PUM1Q14671 1186 aaKnown RBP eCLIP19.01■□□□□ 0.63
PNKP-225ENST00000636214 DGLUCYQ7Z3D6 616 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 WDR5BQ86VZ2 330 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 KIAA1958Q8N8K9 716 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 ELMO3Q96BJ8 720 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 RMDN1Q96DB5 314 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 GOLPH3LQ9H4A5 285 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 RMND1Q9NWS8 449 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 COMMD8Q9NX08 183 aa19.01■□□□□ 0.63
PNKP-225ENST00000636214 PRR5-ARHGAP8B1AHC4 643 aa19■□□□□ 0.63
PNKP-225ENST00000636214 ASS1P00966 412 aaKnown RBP19■□□□□ 0.63
PNKP-225ENST00000636214 OAS1P00973 400 aaKnown RBP19■□□□□ 0.63
PNKP-225ENST00000636214 RETP07949 1114 aa19■□□□□ 0.63
PNKP-225ENST00000636214 CCDC192P0DO97 292 aa19■□□□□ 0.63
PNKP-225ENST00000636214 GCLMP48507 274 aa19■□□□□ 0.63
PNKP-225ENST00000636214 ARHGAP8P85298 464 aa19■□□□□ 0.63
PNKP-225ENST00000636214 DMWDQ09019 674 aa19■□□□□ 0.63
PNKP-225ENST00000636214 HECTD3Q5T447 861 aa19■□□□□ 0.63
PNKP-225ENST00000636214 SPOPLQ6IQ16 392 aa19■□□□□ 0.63
PNKP-225ENST00000636214 FILIP1Q7Z7B0 1213 aa19■□□□□ 0.63
PNKP-225ENST00000636214 RPLP0P6Q8NHW5 317 aa19■□□□□ 0.63
PNKP-225ENST00000636214 KCNK16Q96T55 309 aa19■□□□□ 0.63
PNKP-225ENST00000636214 SDCBP2Q9H190 292 aa19■□□□□ 0.63
PNKP-225ENST00000636214 LINC00597Q9H2U6 94 aa19■□□□□ 0.63
PNKP-225ENST00000636214 FBXO44Q9H4M3 255 aa19■□□□□ 0.63
PNKP-225ENST00000636214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19■□□□□ 0.63
PNKP-225ENST00000636214 FAM49BQ9NUQ9 324 aa19■□□□□ 0.63
PNKP-225ENST00000636214 CFAP97Q9P2B7 532 aa19■□□□□ 0.63
PNKP-225ENST00000636214 STX10O60499 249 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 AKAP3O75969 853 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 ADH1CP00326 375 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 FAM200BP0CF97 657 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 TRIM49P0CI25 452 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 TRIM49CP0CI26 452 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 EPB41P11171 864 aaKnown RBP18.99■□□□□ 0.63
PNKP-225ENST00000636214 CCDC130P13994 396 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms