RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 POC1B-GALNT4F8VUJ3 575 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 TRDMT1O14717 391 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 GAS2O43903 313 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 CAMTA2O94983 1202 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 GSTM1P09488 218 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 RBP3P10745 1247 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 THRAP10827 490 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 RARGP13631 454 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 TAC1P20366 129 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SRP54P61011 504 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 SSTP61278 116 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MAPRE1Q15691 268 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 TBCCQ15814 346 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 KCNT1Q5JUK3 1230 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MEI1Q5TIA1 1274 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 AGAP7PQ5VUJ5 663 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 GARNL3Q5VVW2 1013 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 UBE2UQ5VVX9 321 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 FAM205BPQ63HN1 556 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 STYK1Q6J9G0 422 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 WDR59Q6PJI9 974 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 USP37Q86T82 979 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ADAMTS16Q8TE57 1224 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PIK3R3Q92569 461 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PHF21AQ96BD5 680 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SLC39A13Q96H72 371 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 RNPEPQ9H4A4 650 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MRPS7Q9Y2R9 242 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 IPPQ9Y573 584 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PCDHGA10Q9Y5H3 936 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MAP3K4Q9Y6R4 1608 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 FAM237AA0A1B0GTK4 181 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ARHGEF37A1IGU5 675 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 C12orf71A8MTZ7 269 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CHL1O00533 1208 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PJA2O43164 708 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 FOXO3O43524 673 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PEX1O43933 1283 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SRGNP10124 158 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 RAG1P15918 1043 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ALAS2P22557 587 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PON1P27169 355 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ZAP70P43403 619 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CTDSPL2Q05D32 466 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 HMBOX1Q6NT76 420 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CYP20A1Q6UW02 462 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 UNC5DQ6UXZ4 953 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SETD3Q86TU7 594 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 ZNF589Q86UQ0 364 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 ULK2Q8IYT8 1036 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ZNF579Q8NAF0 562 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 PSPC1Q8WXF1 523 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 ZNF560Q96MR9 790 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 STOML2Q9UJZ1 356 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 INPP5FQ9Y2H2 1132 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 INO80Q9ULG1 1556 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 GTPBP10A4D1E9 387 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 A8MU76 341 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MEI4A8MW99 385 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 RNF225M0QZC1 329 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 PLSCR1O15162 318 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 DENRO43583 198 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 TM7SF2O76062 418 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 TTLL1O95922 423 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 EGFRP00533 1210 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 FGGP02679 453 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CCNA2P20248 432 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 GSTM2P28161 218 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PEX2P28328 305 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 NR4A2P43354 598 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 NKX2-5P52952 324 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 BNC1Q01954 994 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ARID5AQ03989 594 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ZNF33BQ06732 778 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SSRP1Q08945 709 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 PGS1Q32NB8 556 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MCMDC2Q4G0Z9 681 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ATG16L1Q676U5 607 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ILDR1Q86SU0 546 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 ZNF677Q86XU0 584 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SSH3Q8TE77 659 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MAP6Q96JE9 813 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SERPINI1Q99574 410 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 GAL3ST1Q99999 423 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 VPS33BQ9H267 617 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 NEUROG2Q9H2A3 272 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 FBXO28Q9NVF7 368 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ARL8BQ9NVJ2 186 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 POLR3BQ9NW08 1133 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.33□□□□□ -1.43e-6■□□□□ 10.7
CHD2-221ENST00000635856 VPS54Q9P1Q0 977 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PNPLA7Q6ZV29 1317 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CAPN8A6NHC0 703 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PDZK1P1A8MUH7 402 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 PRSS44E7EML9 344 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ENPP3O14638 875 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 KPNA5O15131 536 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 HDAC3O15379 428 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms