RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 PDGFRAP16234 1089 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 PBX3P40426 434 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ZNF143P52747 638 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 YWHAHQ04917 246 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SMTNL2Q2TAL5 461 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 LRRC38Q5VT99 294 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 WDR93Q6P2C0 686 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 FAM43BQ6ZT52 329 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 GPRIN1Q7Z2K8 1008 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ZDHHC17Q8IUH5 632 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 CCDC50Q8IVM0 306 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 GSPT2Q8IYD1 628 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 EXD1Q8NHP7 514 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 NDRG1Q92597 394 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 TRIM43Q96BQ3 446 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 CFAP57Q96MR6 1250 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 PEBP4Q96S96 227 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 KCNK16Q96T55 309 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 CNPY3Q9BT09 278 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ZWILCHQ9H900 591 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 PRDM5Q9NQX1 630 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ADAM28Q9UKQ2 775 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 PTPRSQ13332 1948 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ARHGEF37A1IGU5 675 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 FSCN2O14926 492 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SART1O43290 800 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 TADA2AO75478 443 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 HEXIM1O94992 359 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 UPP2O95045 317 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 OR4Q2P0C623 313 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 MYBL2P10244 700 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 RARAP10276 462 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 RALAP11233 206 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 TFE3P19532 575 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 MIPP30301 263 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 NDUFV1P49821 464 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC8A3P57103 927 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SNX16P57768 344 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 CDO1Q16878 200 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 CCDC70Q6NSX1 233 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 MFSD7Q6UXD7 560 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 THEM5Q8N1Q8 247 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 BCL7CQ8WUZ0 217 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 KCTD13Q8WZ19 329 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 RAPGEF5Q92565 580 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SMARCD1Q96GM5 515 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SLITRK1Q96PX8 696 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ADAM33Q9BZ11 813 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 STIM2Q9P246 746 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 PCSK1NQ9UHG2 260 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 GOLGA6L10A0A0M3HER8 536 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 CCDC151A5D8V7 595 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 NT5C1B-RDH14C9J2C7 533 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 HHLA1C9JL84 531 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 PHF2O75151 1096 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ZRANB2O95218 330 aaKnown RBP eCLIP10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 GALTP07902 379 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 GLI1P08151 1106 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 CSF2RAP15509 400 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 BDNFP23560 247 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 RFC2P35250 354 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 SCNN1AP37088 669 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ATP11AP98196 1134 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 BRD3Q15059 726 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 CLUL1Q15846 466 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 GLE1Q53GS7 698 aaKnown RBP10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 KCNT1Q5JUK3 1230 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ZFYVE27Q5T4F4 411 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 TTC27Q6P3X3 843 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 CYP4V2Q6ZWL3 525 aaPredicted RBP10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 POLNQ7Z5Q5 900 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 NECAB2Q7Z6G3 386 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 SIX6OS1Q8N1H7 587 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 RBM41Q96IZ5 413 aaKnown RBP10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 B3GALT6Q96L58 329 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 HEMGNQ9BXL5 484 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 GPR62Q9BZJ7 368 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ULBP1Q9BZM6 244 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 SLITRK6Q9H5Y7 841 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 LRRC4Q9HBW1 653 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ASNSD1Q9NWL6 643 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ZNF446Q9NWS9 450 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
CACNA1A-216ENST00000635742 ESYT3A0FGR9 886 aa10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 LRRD1A4D1F6 860 aa10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 SYN3O14994 580 aa10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 TTI1O43156 1089 aa10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 TRAPPC3O43617 180 aa10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 DAB1O75553 588 aa10.46□□□□□ -0.73
CACNA1A-216ENST00000635742 CAPN15O75808 1086 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms