RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MTNR1BP49286 362 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 NEK2P51955 445 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF280AP59817 542 aaPredicted RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 GNAI1P63096 354 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 GPSM2P81274 684 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 HTRA4P83105 476 aaPredicted RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 GHRHRQ02643 423 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 TARDBPQ13148 414 aaKnown RBP eCLIP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 GTF2H3Q13889 308 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ODF1Q14990 250 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 KHDC1Q4VXA5 237 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ODR4Q5SWX8 454 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 IFIT1BQ5T764 474 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 DAB2IPQ5VWQ8 1189 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 GSG1LQ6UXU4 331 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 CATIPQ7Z7H3 387 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 TTC7BQ86TV6 843 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PIM3Q86V86 326 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 WDR75Q8IWA0 830 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC15A3Q8IY34 581 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ANKRD13AQ8IZ07 590 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 GALNT4Q8N4A0 578 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 POC1BQ8TC44 478 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 NR4A3Q92570 626 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 TNPO1Q92973 898 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 CHMP4CQ96CF2 233 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 R3HDM4Q96D70 268 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 HOOK2Q96ED9 719 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 CAMK1GQ96NX5 476 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 OSBPL9Q96SU4 736 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ZPBPQ9BS86 351 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ASPSCR1Q9BZE9 553 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ARMT1Q9H993 441 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 DUSP22Q9NRW4 184 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 TMEM184CQ9NVA4 438 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 HEY2Q9UBP5 337 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ABCF2Q9UG63 623 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 TUBD1Q9UJT1 453 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 SERTAD3Q9UJW9 196 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 LIMCH1Q9UPQ0 1083 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 SPEF1Q9Y4P9 236 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHGA9Q9Y5G4 932 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHGA8Q9Y5G5 932 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHGA7Q9Y5G6 932 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHGA6Q9Y5G7 932 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHGA3Q9Y5H0 932 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHA3Q9Y5H8 950 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 CDK13Q14004 1512 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 ERICH3Q5RHP9 1530 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 SPATA31A3Q5VYP0 1347 aa1.4□□□□□ -2.19
SMARCB1-209ENST00000635578 BRWD3Q6RI45 1802 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 LRRC14BA6NHZ5 514 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 TRIM75PA6NK02 468 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF785A8K8V0 405 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 PRSS47A8MTI9 375 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 UBE2Q2LH0YL09 131 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 K7ESF4 209 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 FZD9O00144 591 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC16A3O15427 465 aaKnown RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 GRID2O43424 1007 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 AP1G1O43747 822 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 MARCH6O60337 910 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 OFD1O75665 1012 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 TOMM40O96008 361 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 IGKV3-20P01619 116 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 GNAI2P04899 355 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 CHRM5P08912 532 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 MYBP10242 640 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 PLA2G2AP14555 144 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 VCAM1P19320 739 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 PDCP20941 246 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 LPOP22079 712 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 ME1P48163 572 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 RAB27AP51159 221 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 ALDH5A1P51649 535 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF135P52742 658 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 ADKP55263 362 aaKnown RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 CDC42EP1Q00587 391 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 SP2Q02086 613 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 PPP2R5AQ15172 486 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 TTF1Q15361 905 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 TWIST1Q15672 202 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 PGS1Q32NB8 556 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 C3orf36Q3SXR2 165 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 L1TD1Q5T7N2 865 aaKnown RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 THEMIS2Q5TEJ8 643 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 WDR53Q7Z5U6 358 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF329Q86UD4 541 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 TPH2Q8IWU9 490 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 PELI3Q8N2H9 469 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 CBARPQ8N350 705 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 CPA6Q8N4T0 437 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 C3orf20Q8ND61 904 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 IL17RDQ8NFM7 739 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 IFI44Q8TCB0 444 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 XAGE5Q8WWM1 108 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 JPH3Q8WXH2 748 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 JDP2Q8WYK2 163 aa1.39□□□□□ -2.19
SMARCB1-209ENST00000635578 DNASE2BQ8WZ79 361 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms