RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	COPS2	P61201	443 aa		13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	ZFYVE27	Q5T4F4	411 aa		13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	KIAA0319	Q5VV43	1072 aa		13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	ZNF280D	Q6N043	979 aa		13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	RTP3	Q9BQQ7	232 aa		13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	CSNK1G1	Q9HCP0	422 aa		13.16	□□□□□ -0.3
PATJ-215	ENST00000635137	TRIM43B	A6NCK2	446 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	C2CD4B	A6NLJ0	364 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137		F8VP50	259 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137		H3BQF6	201 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	CLDN5	O00501	218 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	GJB6	O95452	261 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	LCP1	P13796	627 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	MAP3K7CL	P57077	242 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	DCAF12L1	Q5VU92	463 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	FAM171A1	Q5VUB5	890 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.15	□□□□□ -0.3	2e-8	■■■□□ 17.2
PATJ-215	ENST00000635137	CCDC26	Q8TAB7	109 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	JOSD2	Q8TAC2	188 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	MYLPF	Q96A32	169 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	RUNDC3B	Q96NL0	473 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	TRIM62	Q9BVG3	475 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	MCOLN1	Q9GZU1	580 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	CNGB3	Q9NQW8	809 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	HOMER3	Q9NSC5	361 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	DPYSL4	O14531	572 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	B4GALT3	O60512	393 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	HSF2BP	O75031	334 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	PYGM	P11217	842 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	CSF2RA	P15509	400 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	SLC11A1	P49279	550 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	BCAR1	P56945	870 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	C2orf54	Q08AI8	447 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	PPIG	Q13427	754 aa	Known RBP eCLIP	13.15	□□□□□ -0.3	2e-7	■□□□□ 9.6
PATJ-215	ENST00000635137	ZSCAN26	Q16670	478 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	FUT10	Q6P4F1	479 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	ANKS3	Q6ZW76	656 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	MAATS1	Q7Z4T9	603 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	NOA1	Q8NC60	698 aa	Known RBP	13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	RXFP2	Q8WXD0	754 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	ZBTB9	Q96C00	473 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	FUT8	Q9BYC5	575 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	IL23A	Q9NPF7	189 aa		13.15	□□□□□ -0.3
PATJ-215	ENST00000635137	LTBP2	Q14767	1821 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	PIK3R2	O00459	728 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	FGFR3	P22607	806 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	PTPN9	P43378	593 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	MRPS5	P82675	430 aa	Known RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	OGDH	Q02218	1023 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	ZNF252P-AS1	Q0IIN9	211 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	MRPL58	Q14197	206 aa	Known RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	VARS2	Q5ST30	1063 aa	Known RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	C8orf74	Q6P047	294 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	CCDC50	Q8IVM0	306 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	EMC1	Q8N766	993 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	PKMYT1	Q99640	499 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	ZCWPW1	Q9H0M4	648 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	SLITRK6	Q9H5Y7	841 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	RBM12	Q9NTZ6	932 aa	Known RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	STK39	Q9UEW8	545 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	ATP8B1	O43520	1251 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	RHOXF2B	P0C7M4	288 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	GATM	P50440	423 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	TKTL1	P51854	596 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	YWHAZ	P63104	245 aa	Known RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	ADIG	Q0VDE8	80 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	ZNF211	Q13398	564 aa	Predicted RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	CTXN3	Q4LDR2	81 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	BOLA3	Q53S33	107 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	RAB41	Q5JT25	222 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	VSTM1	Q6UX27	236 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	CEP57	Q86XR8	500 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	SCML4	Q8N228	414 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	SMO	Q99835	787 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	RHOXF2	Q9BQY4	288 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	PARD6B	Q9BYG5	372 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	RRN3	Q9NYV6	651 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
PATJ-215	ENST00000635137	EHD2	Q9NZN4	543 aa		13.14	□□□□□ -0.31
PATJ-215	ENST00000635137		F8W810	466 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	FSCN2	O14926	492 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	PRPSAP2	O60256	369 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	LRCH4	O75427	683 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	ERLIN1	O75477	346 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	BDNF	P23560	247 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	MARCKSL1	P49006	195 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	TAS2R40	P59535	323 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	USP41	Q3LFD5	358 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	SPOUT1	Q5T280	376 aa	Known RBP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	CMTR2	Q8IYT2	770 aa	Known RBP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	OR10T2	Q8NGX3	314 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	IRGQ	Q8WZA9	623 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	ZNF689	Q96CS4	500 aa	Predicted RBP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	TTPAL	Q9BTX7	342 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	TSPYL1	Q9H0U9	437 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms