RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 C17orf75Q9HAS0 396 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 RBM12Q9NTZ6 932 aaKnown RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 DSEQ9UL01 958 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 SPTLC1O15269 473 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 HNRNPCP07910 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CENPCQ03188 943 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CEP78Q5JTW2 689 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 PCSK9Q8NBP7 692 aaKnown RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 RDM1Q8NG50 284 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 STAMBPL1Q96FJ0 436 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 P4HA2O15460 535 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ALBP02768 609 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 FGFR1P11362 822 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 KRT20P35900 424 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 TUBGCP3Q96CW5 907 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CNBD2Q96M20 576 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ADGRB3O60242 1522 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 MYO3AQ8NEV4 1616 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 CYP2C8P10632 490 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 NAMPTP43490 491 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 KPNA1P52294 538 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RABL6Q3YEC7 729 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 TFDP3Q5H9I0 405 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 TMEM120BA0PK00 339 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 MGAT4DA6NG13 374 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 KLRC2P26717 231 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RPS7P62081 194 aaKnown RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 DYNC1I2Q13409 638 aaKnown RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RINLQ6ZS11 566 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 VN1R5Q7Z5H4 357 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RIBC1Q8N443 379 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 SERAC1Q96JX3 654 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 PAPOLBQ9NRJ5 636 aaKnown RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 AGPAT3Q9NRZ7 376 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 CPA4Q9UI42 421 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 BCORL1Q5H9F3 1711 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 KRT34O76011 436 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 DDX42Q86XP3 938 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 CENPLQ8N0S6 344 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 DEPDC7Q96QD5 511 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 NUDT2P50583 147 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 OXCT1P55809 520 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 MYO1HQ8N1T3 1032 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 ILKAPQ9H0C8 392 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 CCDC134Q9H6E4 229 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 GNG14A0A1W2PPG7 69 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 B2RBV5 119 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 OGTO15294 1046 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RHOCP08134 193 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 RRM2P31350 389 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 NME5P56597 212 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 STARD3Q14849 445 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 KYNUQ16719 465 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 DENND1BQ6P3S1 775 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 MROH8Q9H579 483 aa12.15□□□□□ -0.46
SHPRH-211ENST00000629427 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
SHPRH-211ENST00000629427 NFIBO00712 420 aa12.15□□□□□ -0.47
SHPRH-211ENST00000629427 SKAP2O75563 359 aaPredicted RBP12.15□□□□□ -0.47
SHPRH-211ENST00000629427 SERPINB5P36952 375 aa12.15□□□□□ -0.47
SHPRH-211ENST00000629427 COILP38432 576 aaPredicted RBP12.15□□□□□ -0.47
SHPRH-211ENST00000629427 MPZL3Q6UWV2 235 aa12.15□□□□□ -0.47
SHPRH-211ENST00000629427 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.47
SHPRH-211ENST00000629427 RRAGCQ9HB90 399 aa12.15□□□□□ -0.47
SHPRH-211ENST00000629427 SNX8Q9Y5X2 465 aa12.15□□□□□ -0.47
SHPRH-211ENST00000629427 SGPL1O95470 568 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 KLRC1P26715 233 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 BCAT1P54687 386 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 KLHDC7AQ5VTJ3 777 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 LRIG3Q6UXM1 1119 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 ERP27Q96DN0 273 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 PDGFCQ9NRA1 345 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 IFRD1O00458 451 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CAP2P40123 477 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 NAA30Q147X3 362 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 SETD3Q86TU7 594 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 ITIH5Q86UX2 942 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 ERO1BQ86YB8 467 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 RIN3Q8TB24 985 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CENPTQ96BT3 561 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 H0YC42 278 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 PSMD12O00232 456 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 MSH4O15457 936 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms