RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 IFRD2Q12894 506 aaPredicted RBP18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 CCINQ13939 588 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 KRT39Q6A163 491 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 TSSK4Q6SA08 328 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 FUKQ8N0W3 1084 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 CRYBG2Q8N1P7 616 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 SPEM1Q8N4L4 309 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 ZBTB44Q8NCP5 570 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 FBXO32Q969P5 355 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 EXOC4Q96A65 974 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 DNAI2Q9GZS0 605 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 KRT82Q9NSB4 513 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 RBM12Q9NTZ6 932 aaKnown RBP18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 DUS2Q9NX74 493 aaKnown RBP18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 PCDHA5Q9Y5H7 936 aa18.25■□□□□ 0.51
SPTAN1-214ENST00000628614 ABL1P00519 1130 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 CCDC130P13994 396 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 CXCL12P48061 93 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 MXI1P50539 228 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 SLC5A3P53794 718 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 SLC7A9P82251 487 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 GRSF1Q12849 480 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 GAS6Q14393 721 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 WDR44Q5JSH3 913 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 PAQR9Q6ZVX9 377 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 ELOA2Q8IYF1 753 aaPredicted RBP18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 SLC2A14Q8TDB8 520 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 KCNK16Q96T55 309 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 ECT2Q9H8V3 914 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 APOBEC3GQ9HC16 384 aaKnown RBP18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 COMMD8Q9NX08 183 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 HMGXB4Q9UGU5 601 aa18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
SPTAN1-214ENST00000628614 OTOL1A6NHN0 477 aaPredicted RBP18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 TRDMT1O14717 391 aaKnown RBP18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 SLC16A3O15427 465 aaKnown RBP18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 OLFM2O95897 454 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 OAS1P00973 400 aaKnown RBP18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 TDGF1P13385 188 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 SATB1Q01826 763 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 LRRC63Q05C16 580 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 NR1H3Q13133 447 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 ORC1Q13415 861 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 STIM1Q13586 685 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 EML3Q32P44 896 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 TMEM196Q5HYL7 178 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 Q6ZS52 159 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 KIAA1958Q8N8K9 716 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 EEF2KMTQ96G04 330 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 FAXDC2Q96IV6 333 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 NT5C1AQ9BXI3 368 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 WNT6Q9Y6F9 365 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 ANAPC1Q9H1A4 1944 aa18.23■□□□□ 0.51
SPTAN1-214ENST00000628614 LEFTY2O00292 366 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 TNFRSF10BO14763 440 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 LILRB5O75023 590 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 PAPSS2O95340 614 aaPredicted RBP18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 NFATC1O95644 943 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 FAM200BP0CF97 657 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 GJA4P35212 333 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 DDX42Q86XP3 938 aaKnown RBP eCLIP18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 ZC3H3Q8IXZ2 948 aaKnown RBP18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 C12orf29Q8N999 325 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 FBXL13Q8NEE6 735 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 ERCC4Q92889 916 aaPredicted RBP18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 CHFRQ96EP1 664 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 CSNK1G1Q9HCP0 422 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 FAM49BQ9NUQ9 324 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 IL37Q9NZH6 218 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 CPQQ9Y646 472 aa18.22■□□□□ 0.51
SPTAN1-214ENST00000628614 RIF1Q5UIP0 2472 aaKnown RBP18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 PSMA7O14818 248 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 CILPO75339 1184 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 CD58P19256 250 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 DRD1P21728 446 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 PPP1R2P41236 205 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 TCERG1LQ5VWI1 586 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 SNX30Q5VWJ9 437 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 TTC39CQ8N584 583 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 SUMF1Q8NBK3 374 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 SCAMP5Q8TAC9 235 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 RUBCNQ92622 972 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 TWNKQ96RR1 684 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 HNRNPABQ99729 332 aaKnown RBP18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 SMOQ99835 787 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 RNF38Q9H0F5 515 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 FBXO44Q9H4M3 255 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 RAB20Q9NX57 234 aa18.21■□□□□ 0.51
SPTAN1-214ENST00000628614 HELZP42694 1942 aaKnown RBP18.2■□□□□ 0.5
SPTAN1-214ENST00000628614 FAM92AA1XBS5 289 aa18.2■□□□□ 0.5
SPTAN1-214ENST00000628614 MBL2P11226 248 aaPredicted RBP18.2■□□□□ 0.5
SPTAN1-214ENST00000628614 ADORA2BP29275 332 aa18.2■□□□□ 0.5
SPTAN1-214ENST00000628614 TUBP50607 506 aa18.2■□□□□ 0.5
SPTAN1-214ENST00000628614 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms