RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PPP1R26Q5T8A7 1209 aaPredicted RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 SDHAF4Q5VUM1 108 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 SNX30Q5VWJ9 437 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 TMEM150AQ86TG1 271 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 SUGP1Q8IWZ8 645 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 RBBP8NLQ8NC74 664 aaPredicted RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 KHSRPQ92945 711 aaKnown RBP eCLIP14.8□□□□□ -0.047e-7■■■□□ 16
SNRPA1-216ENST00000626000 KCNK16Q96T55 309 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 SMOQ99835 787 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 KXD1Q9BQD3 176 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 BRD9Q9H8M2 597 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 UBE2TQ9NPD8 197 aaPredicted RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 TLR8Q9NR97 1041 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 SAMSN1Q9NSI8 373 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 TDP1Q9NUW8 608 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF638Q14966 1978 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF840PA6NDX5 716 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 HEPACAM2A8MVW5 462 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 BECN2A8MW95 431 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF263O14978 683 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 CHADO15335 359 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 KRT5P13647 590 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 GLULP15104 373 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 TCF3P15923 654 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 HDCP19113 662 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 ACO1P21399 889 aaKnown RBP14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF165P49910 485 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 CDR1P51861 262 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 NUBP1P53384 320 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 BPIFB4P59827 614 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 CNGA2Q16280 664 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 ANO6Q4KMQ2 910 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 MIIPQ5JXC2 388 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 TANGO2Q6ICL3 276 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 PHLDB3Q6NSJ2 640 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 CC2D1AQ6P1N0 951 aaPredicted RBP14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 C11orf57Q6ZUT1 292 aaPredicted RBP14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 RRAGAQ7L523 313 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 MAB21L3Q8N8X9 362 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 BPIFB1Q8TDL5 484 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 RSAD2Q8WXG1 361 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 EXOC4Q96A65 974 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 ZSWIM3Q96MP5 696 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 SLC46A2Q9BY10 475 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 MFSD1Q9H3U5 465 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 FANCLQ9NW38 375 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 SCML2Q9UQR0 700 aa14.79□□□□□ -0.04
SNRPA1-216ENST00000626000 LRRC10BA6NIK2 292 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 O00370 1275 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF132P52740 706 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 CACNA2D1P54289 1103 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 AMPD2Q01433 879 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 GOLGA8FQ08AF8 430 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 GOLGA8DPQ0D2H9 430 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 KRT31Q15323 416 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 GOLGA7BQ2TAP0 167 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 TXNDC8Q6A555 127 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 VITQ6UXI7 678 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 CCDC186Q7Z3E2 898 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 FMNL3Q8IVF7 1028 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ARHGEF19Q8IW93 802 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF276Q8N554 614 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ZMIZ2Q8NF64 920 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 SHC3Q92529 594 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 PBXIP1Q96AQ6 731 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ASIC4Q96FT7 647 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 NELL2Q99435 816 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 PRRX2Q99811 253 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 TRPC7Q9HCX4 862 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 PLCB1Q9NQ66 1216 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ARHGEF3Q9NR81 526 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 LIMA1Q9UHB6 759 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 TSPAN16Q9UKR8 245 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ARHGAP26Q9UNA1 814 aa14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 MRPS17Q9Y2R5 130 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-216ENST00000626000 ANAPC1Q9H1A4 1944 aa14.77□□□□□ -0.04
SNRPA1-216ENST00000626000 MAN2B1O00754 1011 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 TADA3O75528 432 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 OLFM2O95897 454 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 ZDHHC11BP0C7U3 371 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 ZNF18P17022 549 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 SLC9A1P19634 815 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 PLA2G4AP47712 749 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 CLCN5P51795 746 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 KIF11P52732 1056 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 SNX16P57768 344 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 USP46P62068 366 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 GPC5P78333 572 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 SLC7A9P82251 487 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 PTK2Q05397 1052 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 PDGFRLQ15198 375 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 FILIP1LQ4L180 1135 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 HECTD3Q5T447 861 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 STXBP5Q5T5C0 1151 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 KLHDC10Q6PID8 442 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 SCML4Q8N228 414 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms