RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 LEFTY2O00292 366 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 STX10O60499 249 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 LILRB5O75023 590 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 AP1G2O75843 785 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 EPB41P11171 864 aaKnown RBP11.5□□□□□ -0.57
SSBP4-215ENST00000625926 TDGF1P13385 188 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 GJA4P35212 333 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 PRCPP42785 496 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 GALK1P51570 392 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 SLC7A9P82251 487 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 IFRD2Q12894 506 aaPredicted RBP11.5□□□□□ -0.57
SSBP4-215ENST00000625926 USP4Q13107 963 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 NR1H3Q13133 447 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 EML3Q32P44 896 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 COBLL1Q53SF7 1204 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 TMEM196Q5HYL7 178 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 Q6ZS52 159 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 FUKQ8N0W3 1084 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 KIAA1958Q8N8K9 716 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 SUMF1Q8NBK3 374 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 OVCA2Q8WZ82 227 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 RUBCNQ92622 972 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 ATP2A3Q93084 1043 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 FBXO32Q969P5 355 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 TSG101Q99816 390 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 P2RY13Q9BPV8 354 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 HINFPQ9BQA5 517 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 RNF38Q9H0F5 515 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 LINC00597Q9H2U6 94 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 MMRN2Q9H8L6 949 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 APOBEC3GQ9HC16 384 aaKnown RBP11.5□□□□□ -0.57
SSBP4-215ENST00000625926 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.5□□□□□ -0.575e-8■■■■■ 144.6
SSBP4-215ENST00000625926 IL37Q9NZH6 218 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 CHORDC1Q9UHD1 332 aaPredicted RBP11.5□□□□□ -0.57
SSBP4-215ENST00000625926 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 WNT6Q9Y6F9 365 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 MYO15AQ9UKN7 3530 aa11.5□□□□□ -0.57
SSBP4-215ENST00000625926 ZFHX2Q9C0A1 2572 aaPredicted RBP11.5□□□□□ -0.57
SSBP4-215ENST00000625926 TNFRSF10BO14763 440 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 ATG13O75143 517 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 PAPSS2O95340 614 aaPredicted RBP11.49□□□□□ -0.57
SSBP4-215ENST00000625926 OLFM2O95897 454 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
SSBP4-215ENST00000625926 CCDC130P13994 396 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 DRD1P21728 446 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 SLC5A3P53794 718 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 ZXDBP98169 803 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
SSBP4-215ENST00000625926 INCA1Q0VD86 236 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 ORC1Q13415 861 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 FSTL4Q6MZW2 842 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
SSBP4-215ENST00000625926 C12orf29Q8N999 325 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 SCAMP5Q8TAC9 235 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 SPATA20Q8TB22 786 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 CHFRQ96EP1 664 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 EEF2KMTQ96G04 330 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 SMOQ99835 787 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 NT5C1AQ9BXI3 368 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 NIF3L1Q9GZT8 377 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 CSNK1G1Q9HCP0 422 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 KRT82Q9NSB4 513 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 HMGXB4Q9UGU5 601 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 CPQQ9Y646 472 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 TSC2P49815 1807 aa11.49□□□□□ -0.57
SSBP4-215ENST00000625926 SCN1AP35498 2009 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 TPRP12270 2363 aaKnown RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ATRXP46100 2492 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FAM92AA1XBS5 289 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 SLC9A3R1O14745 358 aaPredicted RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 SLC16A3O15427 465 aaKnown RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 BEST1O76090 585 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 NFATC1O95644 943 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FAM200BP0CF97 657 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 MBL2P11226 248 aaPredicted RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 CD58P19256 250 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ADORA2BP29275 332 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 MXI1P50539 228 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 MAP3K7CLP57077 242 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FBXO43Q4G163 708 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 HECTD3Q5T447 861 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 SNX30Q5VWJ9 437 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ANKRD40Q6AI12 368 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ERMP1Q7Z2K6 904 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 LONP2Q86WA8 852 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 DDX42Q86XP3 938 aaKnown RBP eCLIP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ADGRG2Q8IZP9 1017 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 ERCC4Q92889 916 aaPredicted RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 CD101Q93033 1021 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 CYFIP2Q96F07 1278 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms