RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RDXP35241 583 aaKnown RBP15.69■□□□□ 0.1
PNKP-218ENST00000625299 DPP6P42658 865 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 RPL6Q02878 288 aaKnown RBP15.69■□□□□ 0.1
PNKP-218ENST00000625299 GFPT1Q06210 699 aaPredicted RBP15.69■□□□□ 0.1
PNKP-218ENST00000625299 IFRD2Q12894 506 aaPredicted RBP15.69■□□□□ 0.1
PNKP-218ENST00000625299 SEMA3BQ13214 749 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 BYSLQ13895 437 aaKnown RBP15.69■□□□□ 0.1
PNKP-218ENST00000625299 SOWAHAQ2M3V2 549 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 MAP7D1Q3KQU3 841 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 PIP4P1Q86T03 277 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 ADGRG2Q8IZP9 1017 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 CHCHD4Q8N4Q1 142 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 OR2I1PQ8NGU4 316 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 SPATA17Q96L03 361 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 ACCSQ96QU6 501 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 RNF38Q9H0F5 515 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 PILRBQ9UKJ0 227 aa15.69■□□□□ 0.1
PNKP-218ENST00000625299 MYO18AQ92614 2054 aaKnown RBP15.69■□□□□ 0.1
PNKP-218ENST00000625299 SLC9A3R1O14745 358 aaPredicted RBP15.68■□□□□ 0.1
PNKP-218ENST00000625299 GABRDO14764 452 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 AP5Z1O43299 807 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 OPHN1O60890 802 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 ADAM23O75077 832 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 GCNT3O95395 438 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 ADH1CP00326 375 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 PDGFRBP09619 1106 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
PNKP-218ENST00000625299 ADH5P11766 374 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 PFKLP17858 780 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 LMO2P25791 158 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 FAM193AP78312 1265 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 SLC7A9P82251 487 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 MYO1EQ12965 1108 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 HSF5Q4G112 596 aaPredicted RBP15.68■□□□□ 0.1
PNKP-218ENST00000625299 FAM171BQ6P995 826 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 VSTM1Q6UX27 236 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 SYCP3Q8IZU3 236 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 CXorf38Q8TB03 319 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 PCIF1Q9H4Z3 704 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 PDE11AQ9HCR9 933 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 CRTAC1Q9NQ79 661 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 SIX4Q9UIU6 781 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 CDH9Q9ULB4 789 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 SLC6A14Q9UN76 642 aa15.68■□□□□ 0.1
PNKP-218ENST00000625299 NBEAQ8NFP9 2946 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 ZNF840PA6NDX5 716 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 H0Y626 953 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 TRIM66O15016 1216 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 PPP1R37O75864 691 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 TRIM16O95361 564 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 LDHAP00338 332 aaKnown RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 LONP1P36776 959 aaKnown RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 EIF2DP41214 584 aaKnown RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 GRIA2P42262 883 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 KIR2DL1P43626 348 aaPredicted RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 MAPRE1Q15691 268 aaKnown RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 DUOXA1Q1HG43 343 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 SPDYCQ5MJ68 293 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 L1TD1Q5T7N2 865 aaKnown RBP15.67■□□□□ 0.1
PNKP-218ENST00000625299 RHBDF2Q6PJF5 856 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 C19orf48Q6RUI8 117 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 HS2ST1Q7LGA3 356 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 MINDY1Q8N5J2 469 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 NAT16Q8N8M0 369 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 CEP76Q8TAP6 659 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 KBTBD7Q8WVZ9 684 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 ERLEC1Q96DZ1 483 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 HPDLQ96IR7 371 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 ANKRD36BP1Q96IX9 119 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 CBWD1Q9BRT8 395 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 FREM2Q5SZK8 3169 aa15.67■□□□□ 0.1
PNKP-218ENST00000625299 LAMA5O15230 3695 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 TBC1D3BA6NDS4 549 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 F8VP50 259 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 TAF4O00268 1085 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 CHRM1P11229 460 aaPredicted RBP15.66■□□□□ 0.1
PNKP-218ENST00000625299 GJB2P29033 226 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 WASP42768 502 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 TNFRSF4P43489 277 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 TAF10Q12962 218 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 MDH1BQ5I0G3 518 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 LY6G5CQ5SRR4 150 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 PEAR1Q5VY43 1037 aaPredicted RBP15.66■□□□□ 0.1
PNKP-218ENST00000625299 ZNF513Q8N8E2 541 aaPredicted RBP15.66■□□□□ 0.1
PNKP-218ENST00000625299 PCED1BQ96HM7 432 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 MMS19Q96T76 1030 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 ADAMTS20P59510 1910 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 PCDH15Q96QU1 1955 aa15.66■□□□□ 0.1
PNKP-218ENST00000625299 UPK3BL1B0FP48 263 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 UPK3BL2E5RIL1 263 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 TNNC2P02585 160 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 SERPINF2P08697 491 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 HOXB2P14652 356 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 GARTP22102 1010 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 HOXD12P35452 270 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 PPP3CCP48454 512 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 CASP5P51878 434 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms