RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FOXJ1Q92949 421 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 DRC1Q96MC2 740 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 RUSC1Q9BVN2 902 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 KIAA1024Q9UPX6 916 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 PCDHGB2Q9Y5G2 931 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 SCN1AP35498 2009 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 ANAPC1Q9H1A4 1944 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 FLNCQ14315 2725 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 TBC1D3BA6NDS4 549 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 CDKL5O76039 1030 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 CER1O95813 267 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 MAPTP10636 758 aaKnown RBP14.92□□□□□ -0.02
SNX1-214ENST00000625244 ADH5P11766 374 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 MUTP22033 750 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 CCT6AP40227 531 aaKnown RBP14.92□□□□□ -0.02
SNX1-214ENST00000625244 RPL10AP62906 217 aaKnown RBP14.92□□□□□ -0.02
SNX1-214ENST00000625244 TAF1BQ53T94 588 aaPredicted RBP14.92□□□□□ -0.02
SNX1-214ENST00000625244 BMP2KLQ5H9B9 411 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 TRMT11Q7Z4G4 463 aaKnown RBP14.92□□□□□ -0.02
SNX1-214ENST00000625244 FSIP1Q8NA03 581 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 TMEM161BQ8NDZ6 487 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 KCNV2Q8TDN2 545 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 NXPE2Q96DL1 559 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 FAM212AQ96EL1 285 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 NTPCRQ9BSD7 190 aaKnown RBP14.92□□□□□ -0.02
SNX1-214ENST00000625244 MIR1-1HGQ9H1L0 117 aa14.92□□□□□ -0.02
SNX1-214ENST00000625244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.91□□□□□ -0.02
SNX1-214ENST00000625244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.91□□□□□ -0.02
SNX1-214ENST00000625244 ERVH48-1M5A8F1 160 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 TNFSF14O43557 240 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 WISP1O95388 367 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 NTSR1P30989 418 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 CLDN6P56747 220 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 CXADRP78310 365 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 TSPY1Q01534 308 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 NFE2Q16621 373 aaPredicted RBP14.91□□□□□ -0.02
SNX1-214ENST00000625244 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 TMPRSS12Q86WS5 348 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 FMNL3Q8IVF7 1028 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 NAT16Q8N8M0 369 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 IPO4Q8TEX9 1081 aaKnown RBP14.91□□□□□ -0.02
SNX1-214ENST00000625244 TSPAN18Q96SJ8 248 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 ACOX2Q99424 681 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 RNF38Q9H0F5 515 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 RPF1Q9H9Y2 349 aaKnown RBP14.91□□□□□ -0.02
SNX1-214ENST00000625244 C17orf75Q9HAS0 396 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 ZSWIM6Q9HCJ5 1215 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 BRMS1Q9HCU9 246 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 DDX19AQ9NUU7 478 aaKnown RBP14.91□□□□□ -0.02
SNX1-214ENST00000625244 SMPD4Q9NXE4 827 aa14.91□□□□□ -0.02
SNX1-214ENST00000625244 MYO9AB2RTY4 2548 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 MEI4A8MW99 385 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 B8ZZF3 427 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 TRIM24O15164 1050 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 ZBTB24O43167 697 aaPredicted RBP14.9□□□□□ -0.02
SNX1-214ENST00000625244 CTDNEP1O95476 244 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 ADH1CP00326 375 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 TAF6P49848 677 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 TLE3Q04726 772 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 LY6G5CQ5SRR4 150 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 HAUS3Q68CZ6 603 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 IL27RAQ6UWB1 636 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 ETFBKMTQ8IXQ9 262 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 LEO1Q8WVC0 666 aaPredicted RBP14.9□□□□□ -0.02
SNX1-214ENST00000625244 SPIRE2Q8WWL2 714 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 CCSER1Q9C0I3 900 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 ABCB6Q9NP58 842 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 ORC3Q9UBD5 711 aaPredicted RBP14.9□□□□□ -0.02
SNX1-214ENST00000625244 CPQQ9Y646 472 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 AK5Q9Y6K8 562 aa14.9□□□□□ -0.02
SNX1-214ENST00000625244 BSNQ9UPA5 3926 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 E9PMD0 336 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 SLC9A3R1O14745 358 aaPredicted RBP14.89□□□□□ -0.03
SNX1-214ENST00000625244 BCAT2O15382 392 aaPredicted RBP14.89□□□□□ -0.03
SNX1-214ENST00000625244 FDPSP14324 419 aaKnown RBP14.89□□□□□ -0.03
SNX1-214ENST00000625244 ACAT1P24752 427 aaKnown RBP14.89□□□□□ -0.03
SNX1-214ENST00000625244 CD6P30203 668 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 PDE6CP51160 858 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 SLC7A9P82251 487 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 PDIA5Q14554 519 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 TMEM132DQ14C87 1099 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 C10orf76Q5T2E6 689 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 C6orf118Q5T5N4 469 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 EGFLAMQ63HQ2 1017 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 RINT1Q6NUQ1 792 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 C1orf186Q6ZWK4 172 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 SNIP1Q8TAD8 396 aaKnown RBP14.89□□□□□ -0.03
SNX1-214ENST00000625244 BAP1Q92560 729 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 BICD1Q96G01 975 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 TOE1Q96GM8 510 aaKnown RBP14.89□□□□□ -0.03
SNX1-214ENST00000625244 MRGPRX1Q96LB2 322 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 PKMYT1Q99640 499 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 ARID3AQ99856 593 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 GMIPQ9P107 970 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 CFAP97Q9P2B7 532 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 NFE2L3Q9Y4A8 694 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 RAD54BQ9Y620 910 aa14.89□□□□□ -0.03
SNX1-214ENST00000625244 COL5A1P20908 1838 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms