RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 FBXO44Q9H4M3 255 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 CEP250Q9BV73 2442 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 AP1G2O75843 785 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 CKMP06732 381 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 ZDHHC11BP0C7U3 371 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 FAM200BP0CF97 657 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 HDCP19113 662 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 TBXAS1P24557 533 aaPredicted RBP13.19□□□□□ -0.3
LINC00963-217ENST00000624009 YWHAQP27348 245 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 CDR1P51861 262 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 USP46P62068 366 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 USP4Q13107 963 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 FZD5Q13467 585 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 UBXN2BQ14CS0 331 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 ANGPT1Q15389 498 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 ZNF77Q15935 545 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 ITPRIPL2Q3MIP1 535 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 DCAF17Q5H9S7 520 aaPredicted RBP13.19□□□□□ -0.3
LINC00963-217ENST00000624009 TCERG1LQ5VWI1 586 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
LINC00963-217ENST00000624009 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00963-217ENST00000624009 C1orf210Q8IVY1 113 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 SYNPOQ8N3V7 929 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 WHAMMQ8TF30 809 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 FAM3CQ92520 227 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 EEF2KMTQ96G04 330 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 KRT82Q9NSB4 513 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 TMEM30AQ9NV96 361 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 FBXO4Q9UKT5 387 aa13.19□□□□□ -0.3
LINC00963-217ENST00000624009 CLDN5O00501 218 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 OAS1P00973 400 aaKnown RBP13.18□□□□□ -0.3
LINC00963-217ENST00000624009 TARSP26639 723 aaKnown RBP13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CTHP32929 405 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 FMO5P49326 533 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 SLC5A3P53794 718 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 TAF10Q12962 218 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CBWD6Q4V339 395 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CBWD3Q5JTY5 395 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CBWD5Q5RIA9 395 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 SLC2A14Q8TDB8 520 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 ATOH1Q92858 354 aaPredicted RBP13.18□□□□□ -0.3
LINC00963-217ENST00000624009 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 KCNK16Q96T55 309 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CISHQ9NSE2 258 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 HMGXB4Q9UGU5 601 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 RWDD2AQ9UIY3 292 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
LINC00963-217ENST00000624009 C2orf78A6NCI8 922 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 SPECC1L-ADORA2AF8WAN1 911 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 H0Y858 1186 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
LINC00963-217ENST00000624009 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 KPNA1P52294 538 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-217ENST00000624009 RUNX3Q13761 415 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 LRRC32Q14392 662 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 MTF1Q14872 753 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 CCDC40Q4G0X9 1142 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 CT47A1Q5JQC4 288 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-217ENST00000624009 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 ARHGAP17Q68EM7 881 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 CLEC20AQ6ZU45 233 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 ZNF276Q8N554 614 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 C12orf29Q8N999 325 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 ZMIZ2Q8NF64 920 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 FBXO32Q969P5 355 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 TWNKQ96RR1 684 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 SMOQ99835 787 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 FAM126AQ9BYI3 521 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-217ENST00000624009 CLSTN2Q9H4D0 955 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 TRPC7Q9HCX4 862 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 KIAA1257Q9ULG3 409 aa13.17□□□□□ -0.3
LINC00963-217ENST00000624009 MTF2Q9Y483 593 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-217ENST00000624009 COL4A3Q01955 1670 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 BIN1O00499 593 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
LINC00963-217ENST00000624009 CCDC130P13994 396 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 PSEN1P49768 467 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 GCNT1Q02742 428 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 CUL2Q13617 745 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 ZC3H14Q6PJT7 736 aaKnown RBP13.16□□□□□ -0.3
LINC00963-217ENST00000624009 CPA6Q8N4T0 437 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
LINC00963-217ENST00000624009 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms