RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 TP53TG5Q9Y2B4 290 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 EXOC6BQ9Y2D4 811 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ZNF281Q9Y2X9 895 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-204ENST00000623364 MAP4K5Q9Y4K4 846 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 PCDHA10Q9Y5I2 948 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ENTPD2Q9Y5L3 495 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 TP53BP1Q12888 1972 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-204ENST00000623364 CNTNAP5Q8WYK1 1306 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 ABCA4P78363 2273 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 DOCK9Q9BZ29 2069 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 CCDC187A0A096LP49 1063 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 SIGLEC6O43699 453 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 SRGAP2CP0DJJ0 459 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 CD27P26842 260 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 TPMTP51580 245 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 RNASE9P60153 205 aaKnown RBP7.01□□□□□ -1.29
CDKL5-204ENST00000623364 PRKCEQ02156 737 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
CDKL5-204ENST00000623364 ZNF77Q15935 545 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 HSP90AB4PQ58FF6 505 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 ARSIQ5FYB1 569 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 TXNDC8Q6A555 127 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 XYLT1Q86Y38 959 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 SIRT2Q8IXJ6 389 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 SMAP1Q8IYB5 467 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-204ENST00000623364 CHDHQ8NE62 594 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-204ENST00000623364 BEST2Q8NFU1 509 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 RHPN1Q8TCX5 695 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 MAPK15Q8TD08 544 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 NUDT8Q8WV74 236 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 CPB2Q96IY4 423 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 UROC1Q96N76 676 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 PGLYRP2Q96PD5 576 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 SLITRK1Q96PX8 696 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 IL21Q9HBE4 155 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 CD248Q9HCU0 757 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 GDF3Q9NR23 364 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 SAMM50Q9Y512 469 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
CDKL5-204ENST00000623364 IGKV6-21A0A0C4DH24 114 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 A0A1B0GVM2 712 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 KCNJ18B7U540 433 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 PTGESO14684 152 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 PRPF3O43395 683 aaKnown RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 TRAK2O60296 914 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 TSPAN1O60635 241 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 CNTN5O94779 1100 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 P4HBP07237 508 aaKnown RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 COX6B1P14854 86 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 BPIP17213 487 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 SSTR2P30874 369 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 CLCNKBP51801 687 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 PER3P56645 1201 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 BNIP3Q12983 259 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 ADAM9Q13443 819 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 DHX8Q14562 1220 aaKnown RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 TARBP2Q15633 366 aaKnown RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 UPP1Q16831 310 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 MTERF2Q49AM1 385 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 CEP55Q53EZ4 464 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 C10orf76Q5T2E6 689 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 JAKMIP3Q5VZ66 844 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 MON1AQ86VX9 555 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 IQCA1Q86XH1 822 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 ZNF276Q8N554 614 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 KBTBD3Q8NAB2 608 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 MRPS31Q92665 395 aaKnown RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 RRP36Q96EU6 259 aaKnown RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 JPH2Q9BR39 696 aaPredicted RBP7□□□□□ -1.29
CDKL5-204ENST00000623364 EVA1BQ9NVM1 165 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 SEL1LQ9UBV2 794 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 SLC27A5Q9Y2P5 690 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 PCDHB6Q9Y5E3 794 aa7□□□□□ -1.29
CDKL5-204ENST00000623364 RNF212BA8MTL3 300 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 TRIM38O00635 465 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 NPTXRO95502 500 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 IGLV3-19P01714 112 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 CYP17A1P05093 508 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 CENPBP07199 599 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-204ENST00000623364 USP17L7P0C7H9 530 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 ACADMP11310 421 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 PCP11498 1178 aaKnown RBP6.99□□□□□ -1.29
CDKL5-204ENST00000623364 CKMT1AP12532 417 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 RACK1P63244 317 aaKnown RBP6.99□□□□□ -1.29
CDKL5-204ENST00000623364 NAB2Q15742 525 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 ZRANB3Q5FWF4 1079 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 VPS53Q5VIR6 699 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 CD300LGQ6UXG3 332 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 RBM44Q6ZP01 1051 aaKnown RBP6.99□□□□□ -1.29
CDKL5-204ENST00000623364 MFSD6Q6ZSS7 791 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 ASB18Q6ZVZ8 466 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 Q71RC1 249 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-204ENST00000623364 OXR1Q8N573 874 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 APPL2Q8NEU8 664 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 APOBEC4Q8WW27 367 aaKnown RBP6.99□□□□□ -1.29
CDKL5-204ENST00000623364 ESR2Q92731 530 aa6.99□□□□□ -1.29
CDKL5-204ENST00000623364 GABRG3Q99928 467 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms