RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 MAK16Q9BXY0 300 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 FRMD8P1Q9BZ68 369 aaPredicted RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 GRID1Q9ULK0 1009 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 SNX9Q9Y5X1 595 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 LOC102724159A0A0B4J2E5 919 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 CA4P22748 312 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 EPHX2P34913 555 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 GEMIN4P57678 1058 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 DNAJC3Q13217 504 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 DPYSL3Q14195 570 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 ACAP1Q15027 740 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 PWP2Q15269 919 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 GRIK4Q16099 956 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 GOLGA7BQ2TAP0 167 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 SCYL2Q6P3W7 929 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 DARS2Q6PI48 645 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 RMDN2Q96LZ7 410 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 PITPNM3Q9BZ71 974 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 KATNBL1Q9H079 304 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 VTA1Q9NP79 307 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 GPATCH2LQ9NWQ4 482 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 HES2Q9Y543 173 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 KRT4P19013 534 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 FITM2Q8N6M3 262 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 FBF1Q8TES7 1133 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 CD248Q9HCU0 757 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 NGRNQ9NPE2 291 aaKnown RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 SETD4Q9NVD3 440 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 SNTG2Q9NY99 539 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 PSMC3IPQ9P2W1 217 aaPredicted RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 PDHXO00330 501 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 ENDOD1O94919 500 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 NPTXRO95502 500 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 SMPD1P17405 629 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 MGAT5Q09328 741 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 MTFR1Q15390 333 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 CCDC14Q49A88 953 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 ZC3H12AQ5D1E8 599 aaKnown RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 EFHC2Q5JST6 749 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 GLRA4Q5JXX5 417 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 LDLRAD1Q5T700 205 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 IGDCC3Q8IVU1 814 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 PALM2Q8IXS6 379 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 PDIK1LQ8N165 341 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 ATP11CQ8NB49 1132 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 B3GNT5Q9BYG0 378 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 ZNF408Q9H9D4 720 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 SLC24A2Q9UI40 661 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 ZMYND8Q9ULU4 1186 aaPredicted RBP12.51□□□□□ -0.41
TP53-227ENST00000622645 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
TP53-227ENST00000622645 NDC80O14777 642 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 PRPF4O43172 522 aaKnown RBP eCLIP12.5□□□□□ -0.411e-8■■■□□ 16.2
TP53-227ENST00000622645 HCRTO43612 131 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 GSTA1P08263 222 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 IL4RP24394 825 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 HOXA11P31270 313 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 CCNA1P78396 465 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 ROR1Q01973 937 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 USP50Q70EL3 339 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 TBC1D1Q86TI0 1168 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 PARP9Q8IXQ6 854 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 PAFAH2Q99487 392 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 TUBGCP4Q9UGJ1 667 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 E7ESA3 106 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 H7C0C1 242 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 TYROBPO43914 113 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 AVILO75366 819 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 GRM5P41594 1212 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 ATP5OP48047 213 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 SPARCL1Q14515 664 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 KRT81Q14533 505 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 KYAT1Q16773 422 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 GALNTL6Q49A17 601 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms