RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RAB33AQ14088 237 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 SMC1AQ14683 1233 aaKnown RBP18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 TPGS2Q68CL5 300 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 FAM183BPQ6ZVS7 135 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 RNF10Q8N5U6 811 aaKnown RBP18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 C3orf20Q8ND61 904 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 ZNF461Q8TAF7 563 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 ZNF564Q8TBZ8 553 aaPredicted RBP18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 SEPT5Q99719 369 aaPredicted RBP18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 SLC28A3Q9HAS3 691 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 MRPL47Q9HD33 250 aaKnown RBP18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 AFF4Q9UHB7 1163 aaKnown RBP18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 COG5Q9UP83 839 aa18.76■□□□□ 0.59
PTCHD3-202ENST00000622555 HHLA1C9JL84 531 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 TRIM66O15016 1216 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 ABLIM3O94929 683 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 CNPP09543 421 aaKnown RBP18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 GTF2F1P35269 517 aaKnown RBP eCLIP18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 GSCP56915 257 aaPredicted RBP18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 DUSP4Q13115 394 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 TCEAL1Q15170 157 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 IFI16Q16666 785 aaKnown RBP18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 MGAT5BQ3V5L5 792 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 GPRIN1Q7Z2K8 1008 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 SCUBE3Q8IX30 993 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 SIX6OS1Q8N1H7 587 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 MICAL1Q8TDZ2 1067 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 SELENOOQ9BVL4 669 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 CRISPLD1Q9H336 500 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 PNPLA8Q9NP80 782 aa18.75■□□□□ 0.59
PTCHD3-202ENST00000622555 TCRBV5S1A1TA0A578 114 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 H3BNC9 293 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 PAPSS1O43252 624 aaPredicted RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 LPXNO60711 386 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 SOAT2O75908 522 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 GJB6O95452 261 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 HAPLN1P10915 354 aaPredicted RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 TNNT1P13805 278 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 GPR15P49685 360 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 TKTL1P51854 596 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 DDR2Q16832 855 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 FAM102AQ5T9C2 384 aaPredicted RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 MCRS1Q96EZ8 462 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 C8orf48Q96LL4 319 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 EMILIN2Q9BXX0 1053 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 NGRNQ9NPE2 291 aaKnown RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 IRAK3Q9Y616 596 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 CAPN6Q9Y6Q1 641 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 MYO7AQ13402 2215 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 PLXNA3P51805 1871 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 MYO16Q9Y6X6 1858 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 C2orf71A6NGG8 1288 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 ATF2P15336 505 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 GNG11P61952 73 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 RAB41Q5JT25 222 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 ZNF569Q5MCW4 686 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 SDHAF4Q5VUM1 108 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 DCUN1D2Q6PH85 259 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 ZDHHC17Q8IUH5 632 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 MRPL43Q8N983 215 aaKnown RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 ARNTL2Q8WYA1 636 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 KLHL5Q96PQ7 755 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 ALS2CR12Q96Q35 445 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 METTL5Q9NRN9 209 aaKnown RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 PCDHGC5Q9Y5F6 944 aa18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 RANBP2P49792 3224 aaKnown RBP18.74■□□□□ 0.59
PTCHD3-202ENST00000622555 UQCRHLA0A096LP55 91 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 HIDE1A8MVS5 230 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 FSCN2O14926 492 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 MTA2O94776 668 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 ADH1AP07327 375 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 UQCRHP07919 91 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 KRT3P12035 628 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 RPL10AP62906 217 aaKnown RBP18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 SLC6A3Q01959 620 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 MLLT1Q03111 559 aaPredicted RBP18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 OLFML1Q6UWY5 402 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 TPCN2Q8NHX9 752 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 FEZF2Q8TBJ5 459 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 CLEC4CQ8WTT0 213 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 PIWIL1Q96J94 861 aaKnown RBP18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 MCEEQ96PE7 176 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 ULBP1Q9BZM6 244 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 CYP4F11Q9HBI6 524 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 ANAPC7Q9UJX3 599 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 MYO9BQ13459 2157 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 GREB1Q4ZG55 1949 aa18.73■□□□□ 0.59
PTCHD3-202ENST00000622555 ZNF638Q14966 1978 aaKnown RBP18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 SIGLEC16A6NMB1 481 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 FBXO21O94952 628 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 SEC24AO95486 1093 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 KLRC2P26717 231 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 ELF1P32519 619 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 IRS1P35568 1242 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 TUFMP49411 452 aaKnown RBP18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 SLC5A3P53794 718 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 HADHBP55084 474 aaKnown RBP18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 CAMK1Q14012 370 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 PPP1R15BQ5SWA1 713 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 TIFAQ96CG3 184 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms