RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 ITIH4Q14624 930 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 ERMARDQ5T6L9 678 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 C1orf146Q5VVC0 180 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 ZNF572Q7Z3I7 529 aaPredicted RBP13.8□□□□□ -0.2
SIRPA-204ENST00000622179 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
SIRPA-204ENST00000622179 DNAJB3Q8WWF6 145 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 TTC1Q99614 292 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 AP4E1Q9UPM8 1137 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 C4BP0C0L5 1744 aa13.8□□□□□ -0.2
SIRPA-204ENST00000622179 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 ZNF157P51786 506 aaPredicted RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 HUNKP57058 714 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 NPNTQ6UXI9 565 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 LRFN2Q9ULH4 789 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 TIMM13Q9Y5L4 95 aaPredicted RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 SMAPO00193 183 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 SPAG6O75602 509 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 PDHA1P08559 390 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 TTC39BQ5VTQ0 682 aaPredicted RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 DCAF12L1Q5VU92 463 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 ZCCHC9Q8N567 271 aaKnown RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 TFB1MQ8WVM0 346 aaKnown RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 DHX33Q9H6R0 707 aaKnown RBP13.79□□□□□ -0.2
SIRPA-204ENST00000622179 BTBD7Q9P203 1132 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 TIAM2Q8IVF5 1701 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 PYGBP11216 843 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 CNGA2Q16280 664 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 QPCTQ16769 361 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 FBXO47Q5MNV8 452 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 C12orf29Q8N999 325 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 STAMBPL1Q96FJ0 436 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 NOD2Q9HC29 1040 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
SIRPA-204ENST00000622179 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
SIRPA-204ENST00000622179 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 SIGLEC16A6NMB1 481 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 FAM200BP0CF97 657 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 GRIK1P39086 918 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PDK1Q15118 436 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PDK2Q15119 407 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PLEKHH3Q7Z736 793 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 JOSD2Q8TAC2 188 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 GMLQ99445 158 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 WWP1Q9H0M0 922 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 APOBEC3GQ9HC16 384 aaKnown RBP13.78□□□□□ -0.2
SIRPA-204ENST00000622179 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PAEPP09466 180 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 EPHB2P29323 1055 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 COG7P83436 770 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 MAP3K21Q5TCX8 1036 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 NLRP9Q7RTR0 991 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 GBP5Q96PP8 586 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 HEY2Q9UBP5 337 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 MMP8P22894 467 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 CYP2F1P24903 491 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 NUMBP49757 651 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 SPDYCQ5MJ68 293 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 E2F7Q96AV8 911 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 ZNF669Q96BR6 464 aaPredicted RBP13.78□□□□□ -0.2
SIRPA-204ENST00000622179 NTPCRQ9BSD7 190 aaKnown RBP13.78□□□□□ -0.2
SIRPA-204ENST00000622179 KDM4CQ9H3R0 1056 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 BCAP29Q9UHQ4 241 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 KBTBD13C9JR72 458 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 CYB561D2O14569 222 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 MAP3K7O43318 606 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 GMNNO75496 209 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PMLP29590 882 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PGM1P36871 562 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 GTF2A2P52657 109 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 ART3Q13508 389 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 GTF3C2Q8WUA4 911 aaPredicted RBP13.78□□□□□ -0.2
SIRPA-204ENST00000622179 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 APOL2Q9BQE5 337 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 ABCF3Q9NUQ8 709 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 SLC24A2Q9UI40 661 aa13.78□□□□□ -0.2
SIRPA-204ENST00000622179 MROH7Q68CQ1 1323 aa13.77□□□□□ -0.2
SIRPA-204ENST00000622179 TMEM191CA6NGB0 347 aa13.77□□□□□ -0.2
SIRPA-204ENST00000622179 KPNA7A9QM74 516 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms