RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PRRT2Q7Z6L0 340 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 NT5DC4Q86YG4 428 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 KIF2BQ8N4N8 673 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 EMC1Q8N766 993 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 LINC01465Q8N7H1 131 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CFAP61Q8NHU2 1237 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 AFG1LQ8WV93 481 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 TEKT4Q8WW24 435 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC44A1Q8WWI5 657 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 ERP27Q96DN0 273 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 STAMBPL1Q96FJ0 436 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 ANKRD27Q96NW4 1050 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 LRRC37BQ96QE4 947 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 PEBP4Q96S96 227 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 ADPGKQ9BRR6 497 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 INO80BQ9C086 356 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 CXorf56Q9H5V9 222 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SMYD3Q9H7B4 428 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 C10orf88Q9H8K7 445 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 ETNK1Q9HBU6 452 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 GBA2Q9HCG7 927 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLCO1B3Q9NPD5 702 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 SAE1Q9UBE0 346 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 LNPEPQ9UIQ6 1025 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 C15orf41Q9Y2V0 281 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 TEX264Q9Y6I9 313 aa10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 DICER1Q9UPY3 1922 aaKnown RBP10.05□□□□□ -0.8
IGHV3-54-201ENST00000622166 PLXNA1Q9UIW2 1896 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 C2CD4BA6NLJ0 364 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 A8MUI8 341 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF487B1APH4 448 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 M0QYV0 167 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 NOP56O00567 594 aaKnown RBP10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 CXCL11O14625 94 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TGDSO95455 350 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 C22orf31O95567 290 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ANP32DO95626 131 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 MT-ND3P03897 115 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ITGB3P05106 788 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 KRT19P08727 400 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 SETSIPP0DME0 302 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 FGFR1P11362 822 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 CYP3A5P20815 502 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TGM2P21980 687 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ADRA1DP25100 572 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ELK3P41970 407 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 RASSF2P50749 326 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC8A3P57103 927 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 OSTNP61366 133 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ATP11AP98196 1134 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TAF5Q15542 800 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 HSDL1Q3SXM5 330 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 ACCSLQ4AC99 568 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 KCNT1Q5JUK3 1230 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 WASHC2DQ5SRD0 308 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 JADE1Q6IE81 842 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 DARS2Q6PI48 645 aaKnown RBP10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 POTEAQ6S8J7 498 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 LCLAT1Q6UWP7 414 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 GADL1Q6ZQY3 521 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 NLRP9Q7RTR0 991 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 IGDCC3Q8IVU1 814 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TMEM192Q8IY95 271 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 MAB21L3Q8N8X9 362 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 FAM71DQ8N9W8 422 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TCP10LQ8TDR4 215 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRAPPC12Q8WVT3 735 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 RXFP2Q8WXD0 754 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 HSPH1Q92598 858 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 APBB2Q92870 758 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC7A6OSQ96CW6 309 aaPredicted RBP10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TBC1D31Q96DN5 1066 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 APOPT1Q96IL0 206 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 NLRP4Q96MN2 994 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 RNF157Q96PX1 679 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 TUBB6Q9BUF5 446 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 PDZD7Q9H5P4 517 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 USP29Q9HBJ7 922 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 PAK5Q9P286 719 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 RGS17Q9UGC6 210 aaPredicted RBP10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 HMGXB4Q9UGU5 601 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 BARX2Q9UMQ3 279 aaPredicted RBP10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 EVPLQ92817 2033 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 EP400Q96L91 3159 aa10.04□□□□□ -0.8
IGHV3-54-201ENST00000622166 COL1A2P08123 1366 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 E7ENQ6 273 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRDMT1O14717 391 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms