RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SLC34A1Q06495 639 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 SLC30A9Q6PML9 568 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 DEFB129Q9H1M3 183 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 RAB6BQ9NRW1 208 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 DOCK5Q9H7D0 1870 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 VWA5AO00534 786 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 LIN7AO14910 233 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-211ENST00000622020 TM9SF1O15321 606 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 PRKD1Q15139 912 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-211ENST00000622020 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 CES4AQ5XG92 561 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 HIPK4Q8NE63 616 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 SLC7A3Q8WY07 619 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 SKA1Q96BD8 255 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 CPXM1Q96SM3 734 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-211ENST00000622020 GPATCH2LQ9NWQ4 482 aa16.46■□□□□ 0.23
NPHP4-211ENST00000622020 A0A0B4J269 797 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 IQANK1A0A1B0GTG1 560 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 E7ENQ6 273 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 WNT10BO00744 389 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 APBA3O96018 575 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 SLC25A11Q02978 314 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 SCYL2Q6P3W7 929 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 ISLR2Q6UXK2 745 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 PCGF5Q86SE9 256 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 TLE6Q9H808 572 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 QTRT2Q9H974 415 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 PIH1D1Q9NWS0 290 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 NR2E3Q9Y5X4 410 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 TCRBV5S1A1TA0A578 114 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 E2F8A0AVK6 867 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 MCF2LO15068 1137 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 CSDE1O75534 798 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 GJB1P08034 283 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 MIPP30301 263 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 BST1Q10588 318 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 CHI3L2Q15782 390 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 MROH9Q5TGP6 573 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 CIAPIN1Q6FI81 312 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 PPFIBP2Q8ND30 876 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 RBM15BQ8NDT2 890 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 MMP19Q99542 508 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 ASS1P00966 412 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 SKIP12755 728 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 ETV4P43268 484 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 AQP5P55064 265 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 TGFB2P61812 414 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 UBAP2LQ14157 1087 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 ABHD15Q6UXT9 468 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 EFCAB3Q8N7B9 438 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 UBA3Q8TBC4 463 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 USP6NLQ92738 828 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 APOPT1Q96IL0 206 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 PPP1R16BQ96T49 567 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 SH3GL3Q99963 347 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 C20orf27Q9GZN8 174 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 SMYD3Q9H7B4 428 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 PCMTD2Q9NV79 361 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 SCOCQ9UIL1 159 aa16.45■□□□□ 0.22
NPHP4-211ENST00000622020 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
NPHP4-211ENST00000622020 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 SIGLEC16A6NMB1 481 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 APRTP07741 180 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
NPHP4-211ENST00000622020 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 CDH6P55285 790 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 HADHQ16836 314 aaKnown RBP16.44■□□□□ 0.22
NPHP4-211ENST00000622020 C15orf59Q2T9L4 293 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-211ENST00000622020 ZNF699Q32M78 642 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 XKR3Q5GH77 459 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 FAM136AQ96C01 138 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 EBF4Q9BQW3 602 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 KRT82Q9NSB4 513 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.44■□□□□ 0.22
NPHP4-211ENST00000622020 NFASCO94856 1347 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
NPHP4-211ENST00000622020 HSF5Q4G112 596 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-211ENST00000622020 PPP1R15BQ5SWA1 713 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 LRRC38Q5VT99 294 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 POU5F2Q8N7G0 328 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 HMGXB4Q9UGU5 601 aa16.44■□□□□ 0.22
NPHP4-211ENST00000622020 MAP3K7O43318 606 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 FOXB2Q5VYV0 432 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 NETO2Q8NC67 525 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 DHRS4Q9BTZ2 278 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SLC17A6Q9P2U8 582 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 LRCH1Q9Y2L9 728 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SMAPO00193 183 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 KCNN4O15554 427 aa16.43■□□□□ 0.22
NPHP4-211ENST00000622020 SORBS2O94875 1100 aaKnown RBP16.43■□□□□ 0.22
NPHP4-211ENST00000622020 ERBB2P04626 1255 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms