RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ZNF410Q86VK4 478 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 SPATA18Q8TC71 538 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 PYROXD1Q8WU10 500 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 TEKT4Q8WW24 435 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 ACAP3Q96P50 834 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 NT5C1AQ9BXI3 368 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 C10orf88Q9H8K7 445 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 KIF9Q9HAQ2 790 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 PLEKHA5Q9HAU0 1116 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 TSPAN16Q9UKR8 245 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 PDCD11Q14690 1871 aaKnown RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 TCRBV7S3A2A0A539 114 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 ZNF487B1APH4 448 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 E5RJQ4 531 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 GOLGA8MH3BSY2 632 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 CHUKO15111 745 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 ATP2C2O75185 946 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 BANF1O75531 89 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 RBP3P10745 1247 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 RPA3P35244 121 aaPredicted RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 SKIV2L2P42285 1042 aaKnown RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 NCALDP61601 193 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 MGAT5Q09328 741 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 RIPK1Q13546 671 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 TFDP2Q14188 446 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 KCNJ11Q14654 390 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 PDK2Q15119 407 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 SNCBQ16143 134 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 GJC2Q5T442 439 aaPredicted RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 OLFML1Q6UWY5 402 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 ANKMY2Q8IV38 441 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 FITM2Q8N6M3 262 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 FAM71DQ8N9W8 422 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 GPRC5AQ8NFJ5 357 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 UBA3Q8TBC4 463 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 RXFP2Q8WXD0 754 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 HSPH1Q92598 858 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 RMDN2Q96LZ7 410 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 MAK16Q9BXY0 300 aaKnown RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 PITPNM3Q9BZ71 974 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.86□□□□□ -0.83
PDPN-212ENST00000621990 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 SPAG7O75391 227 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ZWINTO95229 277 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ZNF286BP0CG31 522 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 SETSIPP0DME0 302 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 CCNB1P14635 433 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 KRT15P19012 456 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 IL4RP24394 825 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 SSTR1P30872 391 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ROR1Q01973 937 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 RNASELQ05823 741 aaKnown RBP9.85□□□□□ -0.83
PDPN-212ENST00000621990 ZKSCAN8Q15776 578 aaPredicted RBP9.85□□□□□ -0.83
PDPN-212ENST00000621990 DCAF4L1Q3SXM0 396 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 CCDC14Q49A88 953 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 FAM133BQ5BKY9 247 aaKnown RBP9.85□□□□□ -0.83
PDPN-212ENST00000621990 SH3PXD2AQ5TCZ1 1133 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 WDR78Q5VTH9 848 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ASRGL1Q7L266 308 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 TMEM110Q86TL2 294 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 FAM228AQ86W67 206 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 PDIK1LQ8N165 341 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 CCDC63Q8NA47 563 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ANKLE1Q8NAG6 615 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 FBXO36Q8NEA4 188 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 DCAKDQ8WVC6 231 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 PIWIL1Q96J94 861 aaKnown RBP9.85□□□□□ -0.83
PDPN-212ENST00000621990 CALN1Q9BXU9 219 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 XPO7Q9UIA9 1087 aaKnown RBP9.85□□□□□ -0.83
PDPN-212ENST00000621990 SLC45A1Q9Y2W3 748 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 TRIP11Q15643 1979 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 SCN1AP35498 2009 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 A0A1W2PPM1 405 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 H3BRB1 525 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 CHADO15335 359 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 CYP2C8P10632 490 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 PDGFRAP16234 1089 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ADORA2AP29274 412 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 MAGEA6P43360 314 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 CCNA1P78396 465 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ADCY1Q08828 1119 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ZBTB6Q15916 424 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 C3orf62Q6ZUJ4 267 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 ECHDC2Q86YB7 292 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 STK32AQ8WU08 396 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 NLRP7Q8WX94 980 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 KHSRPQ92945 711 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDPN-212ENST00000621990 FAF2Q96CS3 445 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 RNF157Q96PX1 679 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 TBCBQ99426 244 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 PAFAH2Q99487 392 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
PDPN-212ENST00000621990 USP29Q9HBJ7 922 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 KLHL14Q9P2G3 628 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 TEX264Q9Y6I9 313 aa9.85□□□□□ -0.83
PDPN-212ENST00000621990 MDM4O15151 490 aa9.84□□□□□ -0.83
PDPN-212ENST00000621990 PRPSAP2O60256 369 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms