RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TPCN1Q9ULQ1 816 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 MBD3L4A6NDZ8 208 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-229ENST00000621897 MBD3L3A6NE82 208 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-229ENST00000621897 VSTM5A8MXK1 200 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 TPP1O14773 563 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 EXOC3O60645 756 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 SRGAP2O75044 1071 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 PRR35P0CG20 571 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 RPS16P62249 146 aaKnown RBP5.4□□□□□ -1.54
BRCA1-229ENST00000621897 SSBP2P81877 361 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-229ENST00000621897 PSG6Q00889 435 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 GALEQ14376 348 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 CNGA2Q16280 664 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 MTX3Q5HYI7 312 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 RNF220Q5VTB9 566 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 CACHD1Q5VU97 1274 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 KIAA1614Q5VZ46 1190 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 ZNF626Q68DY1 528 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 CCDC149Q6ZUS6 474 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 SPARTQ8N0X7 666 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 MYO1HQ8N1T3 1032 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 TERB1Q8NA31 727 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 LRTOMTQ8WZ04 291 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 PPP1R9BQ96SB3 815 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 C1QTNF7Q9BXJ2 289 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 COL20A1Q9P218 1284 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 AFF4Q9UHB7 1163 aaKnown RBP5.4□□□□□ -1.54
BRCA1-229ENST00000621897 TCEAL9Q9UHQ7 104 aa5.4□□□□□ -1.54
BRCA1-229ENST00000621897 ISM1B1AKI9 464 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 ADAMTS3O15072 1205 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 MARCH6O60337 910 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 PRKCBP05771 671 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 DLDP09622 509 aaKnown RBP5.39□□□□□ -1.55
BRCA1-229ENST00000621897 MYF5P13349 255 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 IL1R1P14778 569 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 ZKSCAN1P17029 563 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-229ENST00000621897 KLRC1P26715 233 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 RENBPP51606 427 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 BCAT1P54687 386 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 FMO1Q01740 532 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 CCNIQ14094 377 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 SUPT20HL1Q3ZLR7 823 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 CHST15Q7LFX5 561 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-229ENST00000621897 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
BRCA1-229ENST00000621897 NEK8Q86SG6 692 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 C14orf80Q86SX3 495 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 SESTD1Q86VW0 696 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 DAZAP1Q96EP5 407 aaKnown RBP5.39□□□□□ -1.55
BRCA1-229ENST00000621897 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 CIPCQ9C0C6 399 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 LPAR3Q9UBY5 353 aa5.39□□□□□ -1.55
BRCA1-229ENST00000621897 DRG1Q9Y295 367 aaKnown RBP5.39□□□□□ -1.55
BRCA1-229ENST00000621897 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 H7C1Q1 480 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 PPP6CO00743 305 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 RASSF9O75901 435 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 RASAL1O95294 804 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ZBED1O96006 694 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 SFPQP23246 707 aaKnown RBP eCLIP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 UQCRC1P31930 480 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 GKP32189 559 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 PTDSS1P48651 473 aaKnown RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ALDH5A1P51649 535 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ITGA8P53708 1063 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 CACNB3P54284 484 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 KLF9Q13886 244 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 POLD3Q15054 466 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 NPY5RQ15761 445 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 KIAA0753Q2KHM9 967 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 CATSPERGQ6ZRH7 1159 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 SMG7Q92540 1137 aaKnown RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 RSPRY1Q96DX4 576 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 APIPQ96GX9 242 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ZBTB45Q96K62 511 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-229ENST00000621897 C5orf34Q96MH7 638 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ASB2Q96Q27 587 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 SNX18Q96RF0 628 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 MMS19Q96T76 1030 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 TRIM5Q9C035 493 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 SEMA4CQ9C0C4 833 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 PDGFCQ9NRA1 345 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ASIC5Q9NY37 505 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 ZNF804BA4D1E1 1349 aa5.38□□□□□ -1.55
BRCA1-229ENST00000621897 TCRBV5S1A1TA0A578 114 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 AGPSO00116 658 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 TP73O15350 636 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CD3EAPO15446 510 aaKnown RBP5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CCP110O43303 1012 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 PMPCBO75439 489 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 TUBB4AP04350 444 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 HGFP14210 728 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 KELP23276 732 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CERS1P27544 350 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 GBX1Q14549 363 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 INSCQ1MX18 579 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CYB5RLQ6IPT4 315 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 ZNF425Q6IV72 752 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 SLC18B1Q6NT16 456 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms