RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 BCAT1P54687 386 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 TPM4P67936 248 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 TAF12Q16514 161 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 RAB41Q5JT25 222 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 PIGZQ86VD9 579 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 UBA3Q8TBC4 463 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 ZNF606Q8WXB4 792 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 FGF14Q92915 247 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
CBWD3-217ENST00000621474 ACSF2Q96CM8 615 aaPredicted RBP15.13■□□□□ 0.01
CBWD3-217ENST00000621474 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 TTYH3Q9C0H2 523 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 DNAI2Q9GZS0 605 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 ATXN3LQ9H3M9 355 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 NLRC4Q9NPP4 1024 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 GDE1Q9NZC3 331 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 UXTQ9UBK9 157 aaPredicted RBP15.13■□□□□ 0.01
CBWD3-217ENST00000621474 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 KIF26AQ9ULI4 1882 aaPredicted RBP15.12■□□□□ 0.01
CBWD3-217ENST00000621474 ANHXE9PGG2 379 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 USP8P40818 1118 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 KIF11P52732 1056 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 BST2Q10589 180 aaKnown RBP15.12■□□□□ 0.01
CBWD3-217ENST00000621474 IFRD2Q12894 506 aaPredicted RBP15.12■□□□□ 0.01
CBWD3-217ENST00000621474 TAF10Q12962 218 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 PARM1Q6UWI2 310 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 RNF135Q8IUD6 432 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 SLC35F5Q8WV83 523 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 RSAD2Q8WXG1 361 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 ASB16Q96NS5 453 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 RPP25Q9BUL9 199 aaKnown RBP15.12■□□□□ 0.01
CBWD3-217ENST00000621474 SLC46A2Q9BY10 475 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 USP3Q9Y6I4 520 aa15.12■□□□□ 0.01
CBWD3-217ENST00000621474 ZFP37Q9Y6Q3 630 aaPredicted RBP15.12■□□□□ 0.01
CBWD3-217ENST00000621474 XPO1O14980 1071 aaKnown RBP15.11■□□□□ 0.01
CBWD3-217ENST00000621474 RTN3O95197 1032 aaPredicted RBP15.11■□□□□ 0.01
CBWD3-217ENST00000621474 FGF19O95750 216 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 ASGR2P07307 311 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 YWHAQP27348 245 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 GPD2P43304 727 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 PLA2G4AP47712 749 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 UBASH3AP57075 661 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 HTR4Q13639 388 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 STILQ15468 1287 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 FILIP1LQ4L180 1135 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 FAM78AQ5JUQ0 283 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 TXNDC8Q6A555 127 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 PMF1Q6P1K2 205 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 NEK11Q8NG66 645 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 SECISBP2LQ93073 1101 aaKnown RBP15.11■□□□□ 0.01
CBWD3-217ENST00000621474 SLC22A12Q96S37 553 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 UBXN6Q9BZV1 441 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 KCNK12Q9HB15 430 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 IFNKQ9P0W0 207 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 CYTH4Q9UIA0 394 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 CUL9Q8IWT3 2517 aa15.11■□□□□ 0.01
CBWD3-217ENST00000621474 ZNF840PA6NDX5 716 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 M0QYV0 167 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 AP5Z1O43299 807 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 THAP12O43422 761 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 ZDHHC11BP0C7U3 371 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 MEA1Q16626 185 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 GPR158Q5T848 1215 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 ZSCAN18Q8TBC5 510 aaPredicted RBP15.1■□□□□ 0.01
CBWD3-217ENST00000621474 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 DDX1Q92499 740 aaKnown RBP15.1■□□□□ 0.01
CBWD3-217ENST00000621474 BAP1Q92560 729 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 PCMTD1Q96MG8 357 aaPredicted RBP15.1■□□□□ 0.01
CBWD3-217ENST00000621474 XPO4Q9C0E2 1151 aaKnown RBP15.1■□□□□ 0.01
CBWD3-217ENST00000621474 RBSNQ9H1K0 784 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 TASP1Q9H6P5 420 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 PCDHGC3Q9UN70 934 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 NUMBLQ9Y6R0 609 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 C2orf78A6NCI8 922 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 PRAMEF12O95522 483 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 SETSIPP0DME0 302 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 CYP11B1P15538 503 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 SOX5P35711 763 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 RPL34P49207 117 aaKnown RBP15.1■□□□□ 0.01
CBWD3-217ENST00000621474 PTK2Q05397 1052 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 SNX30Q5VWJ9 437 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 DENND1BQ6P3S1 775 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 BHLHA9Q7RTU4 235 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 NOP9Q86U38 636 aaKnown RBP15.1■□□□□ 0.01
CBWD3-217ENST00000621474 GPIHBP1Q8IV16 184 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 WDTC1Q8N5D0 677 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 MAB21L3Q8N8X9 362 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 KCTD13Q8WZ19 329 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 RSPRY1Q96DX4 576 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 SLITRK1Q96PX8 696 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 SMOC2Q9H3U7 446 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 TRPV4Q9HBA0 871 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 COMMD8Q9NX08 183 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 OSER1Q9NX31 292 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 EHD2Q9NZN4 543 aa15.1■□□□□ 0.01
CBWD3-217ENST00000621474 GMIPQ9P107 970 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms