RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 KRT4P19013 534 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC9A1P19634 815 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 FGFR2P21802 821 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 BLVRAP53004 296 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 POU4F1Q01851 419 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 FMR1Q06787 632 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 DDR1Q08345 913 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 PRKAA1Q13131 559 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 DGKZQ13574 1117 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 FNDC3BQ53EP0 1204 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SLFN11Q7Z7L1 901 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF557Q8N988 423 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ACSF2Q96CM8 615 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 PGLYRP2Q96PD5 576 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 AAR2Q9Y312 384 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 TLL1O43897 1013 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SRP72O76094 671 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 RTN3O95197 1032 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 AKAP5P24588 427 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 YWHAQP27348 245 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 TGM3Q08188 693 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 CHMP1BQ7LBR1 199 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 WDR49Q8IV35 697 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF473Q8WTR7 871 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 JADE3Q92613 823 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 FUCA2Q9BTY2 467 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 YIPF3Q9GZM5 350 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ZFP69BQ9UJL9 534 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SNX5Q9Y5X3 404 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SMAPO00193 183 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 HAUS5O94927 633 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 PGK1P00558 417 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ATP5BP06576 529 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 HLA-DPA1P20036 260 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 GUCA1AP43080 201 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 RFX3P48380 749 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 TKTL1P51854 596 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 MAP2K5Q13163 448 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 KHDRBS2Q5VWX1 349 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 EFL1Q7Z2Z2 1120 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 CBWD2Q8IUF1 395 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ELOA2Q8IYF1 753 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ST13P4Q8IZP2 240 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ARMC2Q8NEN0 867 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC20A1Q8WUM9 679 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF669Q96BR6 464 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 CLPBQ9H078 707 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 PSMD12O00232 456 aaPredicted RBP10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 IRF6O14896 467 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 CXCL8P10145 99 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 HPGDP15428 266 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 CAPRIN2Q6IMN6 1127 aaKnown RBP10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 RAD9BQ6WBX8 426 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 PALB2Q86YC2 1186 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 PLEKHA8Q96JA3 519 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 CCT8L2Q96SF2 557 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 RIC8BQ9NVN3 520 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 ADGRA2Q96PE1 1338 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 KIF1AQ12756 1690 aa10.15□□□□□ -0.79
CLTCL1-211ENST00000621271 SSU72P8A0A1W2PR75 194 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 HSPA1AP0DMV8 641 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 HSPA1BP0DMV9 641 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 EEF1DP29692 281 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 BST2Q10589 180 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 LRRC8EQ6NSJ5 796 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CEP68Q76N32 757 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 IDI2Q9BXS1 227 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 EIF2AQ9BY44 585 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 FUT8Q9BYC5 575 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 FZD1Q9UP38 647 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 MRPS23Q9Y3D9 190 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CEMIPQ8WUJ3 1361 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 TNS2Q63HR2 1409 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 USP32Q8NFA0 1604 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 VPS26AO75436 327 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 RENBPP51606 427 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 IRAK1P51617 712 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 THOP1P52888 689 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 DDX39BQ13838 428 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 SLC30A10Q6XR72 485 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 MMGT1Q8N4V1 131 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 RBM15Q96T37 977 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 MLXIPLQ9NP71 852 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 DYRK1BQ9Y463 629 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 SALL1Q9NSC2 1324 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 SPAG6O75602 509 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CRTAMO95727 393 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 MYL2P10916 166 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 FGFR4P22455 802 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CCR1P32246 355 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 KRT20P35900 424 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 ANXA11P50995 505 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CNTN2Q02246 1040 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CLEC16AQ2KHT3 1053 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 Q4G0T1 1027 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 RBM43Q6ZSC3 357 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CACUL1Q86Y37 369 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CHP1Q99653 195 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms