RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 BNIP3LO60238 219 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 KRT7P08729 469 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 PECAM1P16284 738 aaPredicted RBP9.46□□□□□ -0.89
GGA3-222ENST00000621217 SERPINB4P48594 390 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 CPT1AP50416 773 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 SKOR1P84550 965 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 MYBPC2Q14324 1141 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 GOLGA7BQ2TAP0 167 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 ANKRD20A4Q4UJ75 823 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 ANKRD20A8PQ5CZ79 823 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 ANKRD20A2Q5SQ80 823 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 ANKRD20A1Q5TYW2 823 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 TRPM8Q7Z2W7 1104 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 PRRT2Q7Z6L0 340 aaPredicted RBP9.46□□□□□ -0.89
GGA3-222ENST00000621217 C12orf29Q8N999 325 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 LPPQ93052 612 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 ASNSD1Q9NWL6 643 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 STRIP2Q9ULQ0 834 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 SLC4A7Q9Y6M7 1214 aa9.46□□□□□ -0.89
GGA3-222ENST00000621217 PAPPAQ13219 1627 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 TTLL13PA6NNM8 815 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 GMNNO75496 209 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 TTC4O95801 387 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 ARF4P18085 180 aaPredicted RBP9.46□□□□□ -0.9
GGA3-222ENST00000621217 KRT4P19013 534 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 TNFRSF8P28908 595 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 OR1G1P47890 313 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 FLT3LGP49771 235 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 ROR1Q01973 937 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 GCNT1Q02742 428 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 MAMLD1Q13495 774 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 FSCN1Q16658 493 aaKnown RBP9.46□□□□□ -0.9
GGA3-222ENST00000621217 DCAF6Q58WW2 860 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 SAMD3Q8N6K7 520 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 C3orf20Q8ND61 904 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 HIPK4Q8NE63 616 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 GLT1D1Q96MS3 346 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 NRAPQ86VF7 1730 aa9.46□□□□□ -0.9
GGA3-222ENST00000621217 MAFO75444 373 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 RECQL4O94761 1208 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 HMBSP08397 361 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 SRGAP2BP0DMP2 458 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 GNL1P36915 607 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 NDST1P52848 882 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 MFSD10Q14728 455 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ZACNQ401N2 412 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 PREPLQ4J6C6 727 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 KRT80Q6KB66 452 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 DENND1BQ6P3S1 775 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 SPOCD1Q6ZMY3 1216 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 SCUBE3Q8IX30 993 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ERP27Q96DN0 273 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 NINJ2Q9NZG7 142 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 FIS1Q9Y3D6 152 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 LRP5O75197 1615 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 TCF4P15884 667 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 NRLP54845 237 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 FCGRTP55899 365 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 TMPRSS15P98073 1019 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 CYLC2Q14093 348 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 UBAP2Q5T6F2 1119 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 RGMBQ6NW40 437 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ARHGAP22Q7Z5H3 698 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 BRSK2Q8IWQ3 736 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 GAD1Q99259 594 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 FAM129AQ9BZQ8 928 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 DRC3Q9H069 523 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 NOCTQ9UK39 431 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 USP15Q9Y4E8 981 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 BTNL10A8MVZ5 291 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 TREHO43280 583 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 STK10O94804 968 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 UBOX5O94941 541 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ACO1P21399 889 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 AP1B1Q10567 949 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 C15orf59Q2T9L4 293 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 FOXR2Q6PJQ5 311 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 LVRNQ6Q4G3 990 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 NPNTQ6UXI9 565 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 DCLK2Q8N568 766 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 PPP4R1Q8TF05 950 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 CRYGNQ8WXF5 182 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 GRAMD1AQ96CP6 724 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 PPP1R36Q96LQ0 422 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 FIZ1Q96SL8 496 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 SH3GL2Q99962 352 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 APOBEC3GQ9HC16 384 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 VTA1Q9NP79 307 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 RHBDL2Q9NX52 303 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 NUDT5Q9UKK9 219 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ARL2BPQ9Y2Y0 163 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 FAM47DPA6NHR8 397 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 RRN3P2A6NIE6 340 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 TTC36A6NLP5 189 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ZBBXA8MT70 800 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 CES2O00748 559 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 COPEO14579 308 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms