RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SUGP1Q8IWZ8 645 aaKnown RBP5.57□□□□□ -1.52
SHMT1-211ENST00000618902 FUKQ8N0W3 1084 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 TXLNBQ8N3L3 684 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 C12orf29Q8N999 325 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 SLC4A11Q8NBS3 891 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 MNS1Q8NEH6 495 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 OR6B3Q8NGW1 331 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 SLC7A14Q8TBB6 771 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 DEPDC1BQ8WUY9 529 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 HNRNPLLQ8WVV9 542 aaKnown RBP5.57□□□□□ -1.52
SHMT1-211ENST00000618902 TFAP2BQ92481 460 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF592Q92610 1267 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 RPGRIP1Q96KN7 1286 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 PPP1R13BQ96KQ4 1090 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF512Q96ME7 567 aaPredicted RBP5.57□□□□□ -1.52
SHMT1-211ENST00000618902 NUP58Q9BVL2 599 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 LRRC3Q9BY71 257 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF518BQ9C0D4 1074 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 GANQ9H2C0 597 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 POMKQ9H5K3 350 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 CYP3A43Q9HB55 503 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF334Q9HCZ1 680 aaPredicted RBP5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ACP6Q9NPH0 428 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ASAH2Q9NR71 780 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 ZNHIT6Q9NWK9 470 aaKnown RBP5.57□□□□□ -1.52
SHMT1-211ENST00000618902 HCFC1R1Q9NWW0 138 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 GCNT4Q9P109 453 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 CEP72Q9P209 647 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 DUSP12Q9UNI6 340 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 SIK3Q9Y2K2 1263 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 GVINP1Q7Z2Y8 2422 aa5.57□□□□□ -1.52
SHMT1-211ENST00000618902 EP300Q09472 2414 aaPredicted RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 GTPBP10A4D1E9 387 aaKnown RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 A6NNZ2 444 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 LGALS16A8MUM7 142 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 A8MXQ7 604 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 NCAM2O15394 837 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 KIF5CO60282 957 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 N4BP1O75113 896 aaKnown RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 GABBR2O75899 941 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 BEST1O76090 585 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CFHP08603 1231 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CSH1P0DML2 217 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CSH2P0DML3 217 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 HAPLN1P10915 354 aaPredicted RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 SRFP11831 508 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 HMGA1P17096 107 aaKnown RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FECHP22830 423 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 BDNFP23560 247 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FSHRP23945 695 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CYP2F1P24903 491 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CDC25CP30307 473 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CCR2P41597 374 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 MAGEA11P43364 429 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 AMPD2Q01433 879 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 PRKCQQ04759 706 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ADCY1Q08828 1119 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 TWF1Q12792 350 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 EXOC3L4Q17RC7 722 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 TUBB8Q3ZCM7 444 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF394Q53GI3 561 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 KLHDC7AQ5VTJ3 777 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 TRIM65Q6PJ69 517 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 MAMSTRQ6ZN01 415 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 GBP6Q6ZN66 633 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 PDZD4Q76G19 769 aaPredicted RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 TMC8Q8IU68 726 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 GPIHBP1Q8IV16 184 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FAM114A1Q8IWE2 563 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CRYBG2Q8N1P7 616 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FBXL6Q8N531 539 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 B3GALNT2Q8NCR0 500 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ZMIZ2Q8NF64 920 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CCDC26Q8TAB7 109 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 MYCBPAPQ8TBZ2 947 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 GPR152Q8TDT2 470 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 DNASE1L2Q92874 299 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 PSMG2Q969U7 264 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ELSPBP1Q96BH3 223 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 TCEAL4Q96EI5 215 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 TRMT2BQ96GJ1 504 aaKnown RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 PCED1BQ96HM7 432 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 SPATA17Q96L03 361 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FAM81BQ96LP2 452 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 NT5C1BQ96P26 610 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 LSM14BQ9BX40 385 aaKnown RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 IMPG2Q9BZV3 1241 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 SNX25Q9H3E2 840 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ACBD3Q9H3P7 528 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 SEMA4AQ9H3S1 761 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 KCNK12Q9HB15 430 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 IL21Q9HBE4 155 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CYP4F11Q9HBI6 524 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CD320Q9NPF0 282 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 CISHQ9NSE2 258 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FAM49BQ9NUQ9 324 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 COMMD8Q9NX08 183 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ABI2Q9NYB9 513 aaPredicted RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 DNMT3BQ9UBC3 853 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms