RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 ZNF397Q8NF99 534 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 OR10Z1Q8NGY1 313 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 CALML6Q8TD86 181 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 MAIP1Q8WWC4 291 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 HES6Q96HZ4 224 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 LMF1Q96S06 567 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 CDRT15Q96T59 188 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 GAS2L1Q99501 681 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 PKP4Q99569 1192 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 TRIM2Q9C040 744 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 HIPK3Q9H422 1215 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 TASP1Q9H6P5 420 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 THAP1Q9NVV9 213 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 ADPRHL2Q9NX46 363 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 MBD1Q9UIS9 605 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 CACNG2Q9Y698 323 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 FAM237AA0A1B0GTK4 181 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PTPDC1A2A3K4 754 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 HSBP1L1C9JCN9 74 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PER2O15055 1255 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 THAP12O43422 761 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GUCY1B2O75343 617 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 CAMTA2O94983 1202 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GLAP06280 429 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GAAP10253 952 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 HLA-DPA1P20036 260 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 IL13P35225 146 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 KRT9P35527 623 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 CPT1AP50416 773 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ACTN3Q08043 901 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 LASP1Q14847 261 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 RTP2Q5QGT7 225 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 IYDQ6PHW0 289 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SHQ1Q6PI26 577 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 TRIM72Q6ZMU5 477 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GATAD2AQ86YP4 633 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 CREG2Q8IUH2 290 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ZDHHC17Q8IUH5 632 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ZNF687Q8N1G0 1237 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 LIX1Q8N485 282 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SIMC1Q8NDZ2 872 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 IFT81Q8WYA0 676 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ZUFSPQ96AP4 578 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 METTL2AQ96IZ6 378 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 UBE2OQ9C0C9 1292 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 RC3H2Q9HBD1 1191 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 RPRD1BQ9NQG5 326 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 DTLQ9NZJ0 730 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 NDUFA13Q9P0J0 144 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ACTR3BQ9P1U1 418 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 FAM32AQ9Y421 112 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PMF1-BGLAPU3KQ54 211 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 DBX1A6NMT0 343 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GCOM1H8Y6P7 765 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 NOL3O60936 208 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ADAM11O75078 769 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PGM3O95394 542 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 APOEP02649 317 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 MYZAPP0CAP1 466 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PPP1R2P41236 205 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 YARSP54577 528 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 TPM4P67936 248 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SH3BP2P78314 561 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 RBP5P82980 135 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GCNT1Q02742 428 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SLFN5Q08AF3 891 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 BFSP1Q12934 665 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 CASP8Q14790 479 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 NFIL3Q16649 462 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SLC10A6Q3KNW5 377 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 KMT5BQ4FZB7 885 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SPECC1LQ69YQ0 1117 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 PPP1R2P3Q6NXS1 205 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 HIPK4Q8NE63 616 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 GRK7Q8WTQ7 553 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 TBCBQ99426 244 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 NUDT15Q9NV35 164 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 AASSQ9UDR5 926 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 RCAN3Q9UKA8 241 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 INVSQ9Y283 1065 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 DTX4Q9Y2E6 619 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 RPH3AQ9Y2J0 694 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 DTNAQ9Y4J8 743 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 SNX9Q9Y5X1 595 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 ALPK3Q96L96 1907 aa4.28□□□□□ -1.72
UBE2D3-233ENST00000618836 DNAJC25-GNG10A0A024R161 153 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 A6NLC8 198 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GOLGA8CPA6NN73 597 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 F6X3S4 739 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 FLOT1O75955 427 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 RECQL4O94761 1208 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KLHL18O94889 574 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CST3P01034 146 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CHGBP05060 677 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms