RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TMEM132DQ14C87 1099 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 PDGFRLQ15198 375 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 TERF2Q15554 542 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 USP39Q53GS9 565 aaKnown RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 WSCD1Q658N2 575 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 PMS2CLQ68D20 193 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 SLC39A4Q6P5W5 647 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 THEM5Q8N1Q8 247 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 LINC00301Q8NCQ3 95 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 CACTINQ8WUQ7 758 aaKnown RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 MRPS31Q92665 395 aaKnown RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 EZH1Q92800 747 aaPredicted RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 GATA6Q92908 595 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 ACCSQ96QU6 501 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 PYM1Q9BRP8 204 aaKnown RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 TMEM121BQ9BXQ6 578 aaPredicted RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 PANK2Q9BZ23 570 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 ECT2Q9H8V3 914 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 KIF9Q9HAQ2 790 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 DUS2Q9NX74 493 aaKnown RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 WASF3Q9UPY6 502 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 WNT6Q9Y6F9 365 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 DSPP15924 2871 aaKnown RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 ZNF638Q14966 1978 aaKnown RBP9.15□□□□□ -0.95
GPC6-202ENST00000617456 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 THADAQ6YHU6 1953 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 MYMKA6NI61 221 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 H0YHG0 523 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 GOLGA6L22H0YM25 854 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 CCP110O43303 1012 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 PPFIA2O75334 1257 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 PRPF40AO75400 957 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 HMGA1P17096 107 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 CSRP1P21291 193 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 DDX6P26196 483 aaKnown RBP eCLIP9.14□□□□□ -0.95
GPC6-202ENST00000617456 ADSSP30520 456 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 MAPK8P45983 427 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 IFNAR2P48551 515 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 DHX8Q14562 1220 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 MTF1Q14872 753 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 SURF1Q15526 300 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 MAP9Q49MG5 647 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 C2orf27AQ580R0 203 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 CCDC181Q5TID7 509 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 ANO7Q6IWH7 933 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 LRSAM1Q6UWE0 723 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 MON1AQ86VX9 555 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 DCP1BQ8IZD4 617 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 CCDC33Q8N5R6 958 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 IQUBQ8NA54 791 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 SPPL2BQ8TCT7 592 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 USP28Q96RU2 1077 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 SLX1AQ9BQ83 275 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 ZHX3Q9H4I2 956 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 MRPL44Q9H9J2 332 aaKnown RBP9.14□□□□□ -0.95
GPC6-202ENST00000617456 KIAA1586Q9HCI6 787 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 TMLHEQ9NVH6 421 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 KBTBD4Q9NVX7 518 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 NUP205Q92621 2012 aa9.14□□□□□ -0.95
GPC6-202ENST00000617456 PCNX2A6NKB5 2137 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 SPAARA0A1B0GVQ0 90 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ANTXRLA6NF34 631 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ANKRD63C9JTQ0 380 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 SPTLC2O15270 562 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CUTAO60888 179 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 FAM163BP0C2L3 166 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CSH1P0DML2 217 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CSH2P0DML3 217 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 STAT6P42226 847 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ACOT2P49753 483 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 TAF6P49848 677 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 DDR2Q16832 855 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 SV2CQ496J9 727 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ZC2HC1CQ53FD0 456 aaPredicted RBP9.13□□□□□ -0.95
GPC6-202ENST00000617456 TRIM61Q5EBN2 209 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 KLHL10Q6JEL2 608 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 CRELD2Q6UXH1 353 aaPredicted RBP9.13□□□□□ -0.95
GPC6-202ENST00000617456 USP49Q70CQ1 688 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 DPH6Q7L8W6 267 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 SFR1Q86XK3 245 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 TMEM86AQ8N2M4 240 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 LRRC52Q8N7C0 313 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ATL2Q8NHH9 583 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 TMEM174Q8WUU8 243 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 OSCP1Q8WVF1 389 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 RLN3Q8WXF3 142 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 POMGNT1Q8WZA1 660 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ANKRD7Q92527 254 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 TATDN2Q93075 761 aa9.13□□□□□ -0.95
GPC6-202ENST00000617456 ATP2A3Q93084 1043 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms