RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
NR1H3-235ENST00000616973 RFX6Q8HWS3 928 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 ANKRD52Q8NB46 1076 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
NR1H3-235ENST00000616973 ZNF473Q8WTR7 871 aaKnown RBP16.47■□□□□ 0.23
NR1H3-235ENST00000616973 HSPH1Q92598 858 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 KHSRPQ92945 711 aaKnown RBP eCLIP16.47■□□□□ 0.23
NR1H3-235ENST00000616973 TTC25Q96NG3 672 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 TBCBQ99426 244 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 LGALS13Q9UHV8 139 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 IPPQ9Y573 584 aa16.47■□□□□ 0.23
NR1H3-235ENST00000616973 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 E7EVH7 732 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-235ENST00000616973 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 GABBR2O75899 941 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 DESP17661 470 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 GNL1P36915 607 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-235ENST00000616973 SLCO1A2P46721 670 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 SEC24CP53992 1094 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 BCAT1P54687 386 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 DYNLT1P63172 113 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 BST2Q10589 180 aaKnown RBP16.46■□□□□ 0.23
NR1H3-235ENST00000616973 FAM47CQ5HY64 1035 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 ERMARDQ5T6L9 678 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 XPO6Q96QU8 1125 aaKnown RBP16.46■□□□□ 0.23
NR1H3-235ENST00000616973 CCDC77Q9BR77 488 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 DPEP3Q9H4B8 488 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 DNAJC17Q9NVM6 304 aaKnown RBP16.46■□□□□ 0.23
NR1H3-235ENST00000616973 KLK14Q9P0G3 267 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 GGA2Q9UJY4 613 aa16.46■□□□□ 0.23
NR1H3-235ENST00000616973 RRP15Q9Y3B9 282 aaKnown RBP16.46■□□□□ 0.23
NR1H3-235ENST00000616973 SMAPO00193 183 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 PIK3R2O00459 728 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SPTLC1O15269 473 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 FGFR1P11362 822 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 LRPAP1P30533 357 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 C15orf59Q2T9L4 293 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SH3PXD2AQ5TCZ1 1133 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 MAP7D3Q8IWC1 876 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 APPL2Q8NEU8 664 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 PRCCQ92733 491 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 CFAP57Q96MR6 1250 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 CALN1Q9BXU9 219 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 FAM107BQ9H098 131 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SNX25Q9H3E2 840 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 RABEP2Q9H5N1 569 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 NMRK2Q9NPI5 230 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 PPANQ9NQ55 473 aaKnown RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SAE1Q9UBE0 346 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 FARP1Q9Y4F1 1045 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 ZNF487B1APH4 448 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 CHN1P15882 459 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 PECAM1P16284 738 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SDC4P31431 198 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 PTPN9P43378 593 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 ACADSBP45954 432 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 CDH6P55285 790 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 GJA9P57773 515 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SOX4Q06945 474 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 DPYSL3Q14195 570 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 NOMO1Q15155 1222 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 SLC26A9Q7LBE3 791 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 EXOC3L1Q86VI1 746 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 FAM228AQ86W67 206 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 RIBC1Q8N443 379 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 TOP6BLQ8N6T0 577 aa16.45■□□□□ 0.22
NR1H3-235ENST00000616973 MTG1Q9BT17 334 aaPredicted RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 MAK16Q9BXY0 300 aaKnown RBP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.45■□□□□ 0.22
NR1H3-235ENST00000616973 ATXN2Q99700 1313 aaKnown RBP16.44■□□□□ 0.22
NR1H3-235ENST00000616973 A0A087WUV0 522 aaPredicted RBP16.44■□□□□ 0.22
NR1H3-235ENST00000616973 MCF2LO15068 1137 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 MDM4O15151 490 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 ALOX15BO15296 676 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 WARSP23381 471 aaKnown RBP16.44■□□□□ 0.22
NR1H3-235ENST00000616973 EIF3EP60228 445 aaKnown RBP16.44■□□□□ 0.22
NR1H3-235ENST00000616973 MRPS6P82932 125 aaKnown RBP16.44■□□□□ 0.22
NR1H3-235ENST00000616973 PPIL6Q8IXY8 311 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 MDM1Q8TC05 714 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 ATXN2LQ8WWM7 1075 aaKnown RBP16.44■□□□□ 0.22
NR1H3-235ENST00000616973 RSAD2Q8WXG1 361 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 HSFY1Q96LI6 401 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 C9orf72Q96LT7 481 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 RNF157Q96PX1 679 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 SELENOSQ9BQE4 189 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 CCDC134Q9H6E4 229 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 SAYSD1Q9NPB0 183 aa16.44■□□□□ 0.22
NR1H3-235ENST00000616973 C5orf60A6NFR6 353 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 HUS1O60921 280 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 CDH16O75309 829 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 GRAP2O75791 330 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 IFNB1P01574 187 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 STIP1P31948 543 aaKnown RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 GDF10P55107 478 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 NKX3-2P78367 333 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms