RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 MMRN1Q13201 1228 aa16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 BYSLQ13895 437 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 CRYMQ14894 314 aa16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 HP1BP3Q5SSJ5 553 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 EPS8L3Q8TE67 593 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 CLEC4CQ8WTT0 213 aa16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 SLCO2A1Q92959 643 aa16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 CFAP57Q96MR6 1250 aa16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 PEBP4Q96S96 227 aa16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 UBQLN1Q9UMX0 589 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-212ENST00000616701 HMGB1P1B2RPK0 211 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 PDGFRAP16234 1089 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 CRYBB1P53674 252 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 P3H1Q32P28 736 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 IZUMO3Q5VZ72 239 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 SCYL2Q6P3W7 929 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 KCTD6Q8NC69 237 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 LPPQ93052 612 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 CALN1Q9BXU9 219 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 CDY2AQ9Y6F7 541 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 CST8O60676 142 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 RARBP10826 455 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 FLT3LGP49771 235 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 LRRC38Q5VT99 294 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 GDF6Q6KF10 455 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 ARL10Q8N8L6 244 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 SPDYE1Q8NFV5 336 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 WHRNQ9P202 907 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 NEU2Q9Y3R4 380 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 RIPK2O43353 540 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 GABBR2O75899 941 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 STAU1O95793 577 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 HADHQ16836 314 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 DDX56Q9NY93 547 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
SEMA3B-212ENST00000616701 KPNA7A9QM74 516 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 RNF8O76064 485 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 KDELR1P24390 212 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 ACAT1P24752 427 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 GABRB2P47870 512 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 NRLP54845 237 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 CYP4F22Q6NT55 531 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 RFX6Q8HWS3 928 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 KBTBD7Q8WVZ9 684 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 DERAQ9Y315 318 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 GRIN2DO15399 1336 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 ATP2C2O75185 946 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 LCP1P13796 627 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 ITIH2P19823 946 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 GPD1P21695 349 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 ARSEP51690 589 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 RABGGTBP53611 331 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 OTUD4Q01804 1114 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 PRKCZQ05513 592 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 KYNUQ16719 465 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 RHBDF2Q6PJF5 856 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 KDM7AQ6ZMT4 941 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 ACTL9Q8TC94 416 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 HOMER3Q9NSC5 361 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 HESX1Q9UBX0 185 aa16.31■□□□□ 0.2
SEMA3B-212ENST00000616701 SGK1O00141 431 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 PIRO00625 290 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 DUSP11O75319 330 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 TRUB2O95900 331 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 RARGP13631 454 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 TFE3P19532 575 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 GBP1P32455 592 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 GNL1P36915 607 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 RANBP1P43487 201 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 GPS1Q13098 491 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 MTM1Q13496 603 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 NPNTQ6UXI9 565 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 LRRC52Q8N7C0 313 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 LRRN4Q8WUT4 740 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 NDRG1Q92597 394 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 FOXO6A8MYZ6 492 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 EBAG9O00559 213 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 MAP3K6O95382 1288 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 KRT7P08729 469 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 GNAT1P11488 350 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 KLRC2P26717 231 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 AXLP30530 894 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 IFI35P80217 286 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 LONRF1Q17RB8 773 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 CCDC38Q502W7 563 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 SNX25Q9H3E2 840 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 ST3GAL5Q9UNP4 418 aa16.3■□□□□ 0.2
SEMA3B-212ENST00000616701 C2CD4BA6NLJ0 364 aa16.29■□□□□ 0.2
SEMA3B-212ENST00000616701 PAPSS1O43252 624 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms