RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SPATA1Q5VX52 437 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 C1orf186Q6ZWK4 172 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 ALLCQ8N6M5 410 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 NTPCRQ9BSD7 190 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 CAPN10Q9HC96 672 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 CACNA2D2Q9NY47 1150 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 BCCIPQ9P287 314 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 PTPRDP23468 1912 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 BPTFQ12830 3046 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 DENND4CQ5VZ89 1909 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SH3BP5O60239 455 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 CKMP06732 381 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SERPINF2P08697 491 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SLC12A3P55017 1021 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 MRPS21P82921 87 aaKnown RBP18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SMARCB1Q12824 385 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 ENOX2Q16206 610 aaKnown RBP18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SDHAF4Q5VUM1 108 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 C9orf57Q5W0N0 161 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SFTPA1Q8IWL2 248 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 DEFB119Q8N690 84 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 MLKLQ8NB16 471 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 TXNDC5Q8NBS9 432 aaKnown RBP18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 CEP76Q8TAP6 659 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 BPIFA3Q9BQP9 254 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 C17orf75Q9HAS0 396 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 SCUBE2Q9NQ36 999 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 DSEQ9UL01 958 aa18.83■□□□□ 0.61
TRAPPC3-209ENST00000616395 OBSL1O75147 1896 aa18.83■□□□□ 0.6
TRAPPC3-209ENST00000616395 ZNF638Q14966 1978 aaKnown RBP18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 SGK1O00141 431 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 KLF8O95600 359 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 USP17L7P0C7H9 530 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 FTH1P19P0C7X4 201 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 CSH1P0DML2 217 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 CSH2P0DML3 217 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 MAPTP10636 758 aaKnown RBP18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 PAX3P23760 479 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 PNOCQ13519 176 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 MCM6Q14566 821 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 GAB4Q2WGN9 574 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 METTL23Q86XA0 190 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 THEM5Q8N1Q8 247 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 IL17RCQ8NAC3 791 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 TMEM161BQ8NDZ6 487 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 SH3RF2Q8TEC5 729 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 HMGB4Q8WW32 186 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 PAGE5Q96GU1 130 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 TMEM206Q9H813 350 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 TMLHEQ9NVH6 421 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 PCDHA5Q9Y5H7 936 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 ADAMTS9Q9P2N4 1935 aa18.82■□□□□ 0.6
TRAPPC3-209ENST00000616395 TRAV19A0A0A6YYK7 116 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 PIRO00625 290 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 CYB561D2O14569 222 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 NFATC1O95644 943 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 CHRM1P11229 460 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 TIE1P35590 1138 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 PPP1R2P41236 205 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 AFMP43652 599 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 ZC2HC1CQ53FD0 456 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 JADE1Q6IE81 842 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 SV2BQ7L1I2 683 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 GPBP1Q86WP2 473 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 SYT2Q8N9I0 419 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 SPIRE2Q8WWL2 714 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 FAM212AQ96EL1 285 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 PI4K2AQ9BTU6 479 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 POLMQ9NP87 494 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 DNAAF2Q9NVR5 837 aaKnown RBP18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 PCDHB5Q9Y5E4 795 aa18.81■□□□□ 0.6
TRAPPC3-209ENST00000616395 PCDH15Q96QU1 1955 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 ARHGAP33O14559 1287 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 RPL6Q02878 288 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 STIM1Q13586 685 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 BYSLQ13895 437 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 ARSHQ5FYA8 562 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 WSCD1Q658N2 575 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 DCP1BQ8IZD4 617 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 PGBD3Q8N328 593 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 ARL14EPQ8N8R7 260 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 TSPAN18Q96SJ8 248 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 RPF1Q9H9Y2 349 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 CBX8Q9HC52 389 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 PCDHB9Q9Y5E1 797 aa18.8■□□□□ 0.6
TRAPPC3-209ENST00000616395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 ANO9A1A5B4 782 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 AP5Z1O43299 807 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 FAM189A1O60320 539 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 NOL4O94818 638 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 PRB1P04280 392 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 ADRB2P07550 413 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 NFICP08651 508 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 GUCY2CP25092 1073 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 C19orf57Q0VDD7 668 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 MESP2Q0VG99 397 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 E2F4Q16254 413 aa18.79■□□□□ 0.6
TRAPPC3-209ENST00000616395 DDR2Q16832 855 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms