RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 VAV1P15498 845 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
MSH6-214ENST00000616033 ATP5OP48047 213 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 OLFML1Q6UWY5 402 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 RBM44Q6ZP01 1051 aaKnown RBP13.72□□□□□ -0.21
MSH6-214ENST00000616033 ATXN7L3BQ96GX2 97 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 CEP170P1Q96L14 293 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 TLE6Q9H808 572 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 HEY1Q9Y5J3 304 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 ATRNL1Q5VV63 1379 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 TCRBV9S1A1TA0A576 114 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 DGKIO75912 1065 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
MSH6-214ENST00000616033 GTF2H1P32780 548 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 MAGEA8P43361 318 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 CDK7P50613 346 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 OGDHQ02218 1023 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 EFHC2Q5JST6 749 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 DARS2Q6PI48 645 aaKnown RBP13.72□□□□□ -0.21
MSH6-214ENST00000616033 HPS6Q86YV9 775 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 CRLF3Q8IUI8 442 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 VPS11Q9H270 941 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 ZNF180Q9UJW8 692 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 HEMK1Q9Y5R4 338 aaPredicted RBP13.72□□□□□ -0.21
MSH6-214ENST00000616033 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 DYTNA2CJ06 578 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 PSTPIP1O43586 416 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 ZNF862O60290 1169 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 KCNA4P22459 653 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 PSMA2P25787 234 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 LIG4P49917 911 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 CASC4Q6P4E1 433 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 ZBTB46Q86UZ6 589 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 KATNAL2Q8IYT4 538 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 NDUFAF2Q8N183 169 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 FAF2Q96CS3 445 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 C20orf27Q9GZN8 174 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 PDGFDQ9GZP0 370 aaPredicted RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 SLC17A6Q9P2U8 582 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 PCDHGB4Q9UN71 923 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 COL22A1Q8NFW1 1626 aaPredicted RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 LSM1O15116 133 aaKnown RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 RAG1P15918 1043 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 TCN1P20061 433 aaPredicted RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 OSTNP61366 133 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 RPL10AP62906 217 aaKnown RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 SPP2Q13103 211 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 CBX3Q13185 183 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 DGKZQ13574 1117 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 CYTH1Q15438 398 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 MON1BQ7L1V2 547 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 SH3BP5LQ7L8J4 393 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 MAP7D3Q8IWC1 876 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 RCOR2Q8IZ40 523 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 NAT14Q8WUY8 206 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 WDR83Q9BRX9 315 aaKnown RBP13.71□□□□□ -0.21
MSH6-214ENST00000616033 KLHL4Q9C0H6 718 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 ARHGEF4Q9NR80 690 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 SLC9A2Q9UBY0 812 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.21
MSH6-214ENST00000616033 CXorf49A8MYA2 514 aaPredicted RBP13.71□□□□□ -0.22
MSH6-214ENST00000616033 NFIBO00712 420 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 P4HA2O15460 535 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 HNRNPCL1O60812 293 aaKnown RBP13.71□□□□□ -0.22
MSH6-214ENST00000616033 RBP3P10745 1247 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.22
MSH6-214ENST00000616033 CYP24A1Q07973 514 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 MMRN1Q13201 1228 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.22
MSH6-214ENST00000616033 TFDP3Q5H9I0 405 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 PPIL6Q8IXY8 311 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 TTLL6Q8N841 843 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 KCTD6Q8NC69 237 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.22
MSH6-214ENST00000616033 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 NYAP2Q9P242 653 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.22
MSH6-214ENST00000616033 ADCY3O60266 1144 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 EIF4BP23588 611 aaKnown RBP13.7□□□□□ -0.22
MSH6-214ENST00000616033 GPC3P51654 580 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 SCYL2Q6P3W7 929 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 ADGRD1Q6QNK2 874 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 TMEM179Q6ZVK1 233 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 DEFB107AQ8IZN7 70 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 NETO2Q8NC67 525 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 FAM81BQ96LP2 452 aa13.7□□□□□ -0.22
MSH6-214ENST00000616033 ACSS3Q9H6R3 686 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms