RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MXI1P50539 228 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 IGBP1P78318 339 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 MRPS6P82932 125 aaKnown RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 DR1Q01658 176 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 GCNT1Q02742 428 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 TRIM32Q13049 653 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 KCNA10Q16322 511 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 METTL13Q8N6R0 699 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 ZFPM2Q8WW38 1151 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 CCT6BQ92526 530 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 RNPC3Q96LT9 517 aaKnown RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 INTS2Q9H0H0 1204 aaKnown RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 CDT1Q9H211 546 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 TRPC7Q9HCX4 862 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 APEX2Q9UBZ4 518 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 CNTN6Q9UQ52 1028 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 LOC105371267A0A1B0GV96 52 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 AP3B1O00203 1094 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 SERPING1P05155 500 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 ASGR1P07306 291 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 UCHL3P15374 230 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 ACADSBP45954 432 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 ACLYP53396 1101 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 BEX3Q00994 111 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 PPP3CAQ08209 521 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 C15orf59Q2T9L4 293 aaPredicted RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 ASTE1Q2TB18 679 aaPredicted RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 WDR59Q6PJI9 974 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 C1orf74Q96LT6 269 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 CELF4Q9BZC1 486 aaKnown RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 PPP1R12CQ9BZL4 782 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 SENP6Q9GZR1 1112 aaPredicted RBP9.22□□□□□ -0.93
VPS11-206ENST00000614944 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.22□□□□□ -0.93
VPS11-206ENST00000614944 GCNT4Q9P109 453 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 NENFQ9UMX5 172 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 MROH7Q68CQ1 1323 aa9.22□□□□□ -0.93
VPS11-206ENST00000614944 TTLL13PA6NNM8 815 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 INPPL1O15357 1258 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 IQCF3P0C7M6 154 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 SRGAP2CP0DJJ0 459 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 CES1P23141 567 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 CHKAP35790 457 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 GUCY2DQ02846 1103 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 SNX17Q15036 470 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 ARL13BQ3SXY8 428 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 CBWD6Q4V339 395 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 CBWD3Q5JTY5 395 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 CBWD5Q5RIA9 395 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 NOTUMQ6P988 496 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 SLC27A1Q6PCB7 646 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 PHLDB2Q86SQ0 1253 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 FBXL13Q8NEE6 735 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 FBF1Q8TES7 1133 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 SEC16BQ96JE7 1060 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 NSMCE3Q96MG7 304 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 IKZF4Q9H2S9 585 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 MINDY3Q9H8M7 445 aa9.21□□□□□ -0.93
VPS11-206ENST00000614944 RBAKQ9NYW8 714 aaPredicted RBP9.21□□□□□ -0.93
VPS11-206ENST00000614944 NOSIPQ9Y314 301 aaKnown RBP9.21□□□□□ -0.93
VPS11-206ENST00000614944 TISP43B9A030 160 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 ZNF254O75437 659 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 SERPINB7O75635 380 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 GLULP15104 373 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 ELNP15502 786 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 MDH1P40925 334 aaKnown RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 SERPINB8P50452 374 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 CDK7P50613 346 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 NLRP11P59045 1033 aaKnown RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 ATP11AP98196 1134 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 DCAF17Q5H9S7 520 aaPredicted RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 ALKAL1Q6UXT8 129 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 LURAP1LQ8IV03 231 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 DNAJC5GQ8N7S2 189 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 KIAA1958Q8N8K9 716 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 NLRP7Q8WX94 980 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 NLRP4Q96MN2 994 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 FAM213AQ9BRX8 229 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 SPATA16Q9BXB7 569 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 GIT1Q9Y2X7 761 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 GPC6Q9Y625 555 aaPredicted RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 BTNL10A8MVZ5 291 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 RNF225M0QZC1 329 aaPredicted RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 TREHO43280 583 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 DGKIO75912 1065 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 ACADSP16219 412 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 ARF4P18085 180 aaPredicted RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 HOXA11P31270 313 aaPredicted RBP9.21□□□□□ -0.94
VPS11-206ENST00000614944 NXNQ6DKJ4 435 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 TRIML2Q8N7C3 387 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 ADPGKQ9BRR6 497 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 PCIF1Q9H4Z3 704 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 MMRN2Q9H8L6 949 aa9.21□□□□□ -0.94
VPS11-206ENST00000614944 KANSL1LA0AUZ9 987 aa9.2□□□□□ -0.94
VPS11-206ENST00000614944 NOTOA8MTQ0 251 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms