RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SLC29A2Q14542 456 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 NPY5RQ15761 445 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 CCDC142Q17RM4 750 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 PTCHD3Q3KNS1 767 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 CACHD1Q5VU97 1274 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 CAND1Q86VP6 1230 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 DNAJB14Q8TBM8 379 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 HASPINQ8TF76 798 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 TMEM171Q8WVE6 324 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 C17orf80Q9BSJ5 609 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 CHST8Q9H2A9 424 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 FAM83DQ9H4H8 585 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 GBA2Q9HCG7 927 aaPredicted RBP6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 GEMIN8Q9NWZ8 242 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 AQP7P3A6NL99 342 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 TARM1B6A8C7 271 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 H7C4K7 107 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 CTGFP29279 349 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 EPHA3P29320 983 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 CARSP49589 748 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 CPT1AP50416 773 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 TIAL1Q01085 375 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 ZNF750Q32MQ0 723 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 TBC1D25Q3MII6 688 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 PCID2Q5JVF3 399 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 FCRL6Q6DN72 434 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 SDR16C5Q8N3Y7 309 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 FANCBQ8NB91 859 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 REPS1Q96D71 796 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 SARGQ9BW04 601 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 BRIP1Q9BX63 1249 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 PCGF6Q9BYE7 350 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 PNPLA8Q9NP80 782 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 SERGEFQ9UGK8 458 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 MID2Q9UJV3 735 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 FER1L4A9Z1Z3 1794 aa6.1□□□□□ -1.43
SCAMP1-205ENST00000614488 PCSK5Q92824 1860 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 AOX1Q06278 1338 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 M0R3H8 397 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 PQBP1O60828 265 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 RASAL1O95294 804 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 MT-ND5P03915 603 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 IL1R2P27930 398 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 MRPS21P82921 87 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 DAG1Q14118 895 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 CYP1B1Q16678 543 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 LY6KQ17RY6 165 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 UNC13DQ70J99 1090 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 KCTD20Q7Z5Y7 419 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 RAB11FIP4Q86YS3 637 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 ABHD11Q8NFV4 315 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 ZNF668Q96K58 619 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 ZC3H10Q96K80 434 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 SNX22Q96L94 193 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 THAP7Q9BT49 309 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 DPCDQ9BVM2 203 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 APOL5Q9BWW9 433 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 TRIM36Q9NQ86 728 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 CCNL1Q9UK58 526 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 ITGB1BP2Q9UKP3 347 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 CAPN11Q9UMQ6 739 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 SNX13Q9Y5W8 968 aa6.09□□□□□ -1.43
SCAMP1-205ENST00000614488 FNDC1Q4ZHG4 1894 aaPredicted RBP6.09□□□□□ -1.44
SCAMP1-205ENST00000614488 WIPF3A6NGB9 483 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 LINC01548A6NM66 108 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 RHPN2P1A8MT19 583 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 PSMD9O00233 223 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 RGS10O43665 173 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 PIAS2O75928 621 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 VNN1O95497 513 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 PRKCGP05129 697 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 ANXA2P07355 339 aaKnown RBP6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 TRIM27P14373 513 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 TPH1P17752 444 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 UQCRC1P31930 480 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 MTHFSP49914 203 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 HTRA4P83105 476 aaPredicted RBP6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 HSP90AB2PQ58FF8 381 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 COLEC12Q5KU26 742 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 CCDC136Q96JN2 1154 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 VN1R3Q9BXE9 311 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 DKK4Q9UBT3 224 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 ZNF212Q9UDV6 495 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 USP22Q9UPT9 525 aa6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 DRG1Q9Y295 367 aaKnown RBP6.08□□□□□ -1.44
SCAMP1-205ENST00000614488 F8W8V4 182 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 RAB27BO00194 218 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 IL18RAPO95256 599 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 PHKG2P15735 406 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 BTF3P20290 206 aaKnown RBP6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 GKP32189 559 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 TIRAPP58753 221 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 CYP4F2P78329 520 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 E2F1Q01094 437 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 SLC10A2Q12908 348 aaPredicted RBP6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 SAFBQ15424 915 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 MZT2AQ6P582 158 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 SEMA6DQ8NFY4 1073 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 VOPP1Q96AW1 172 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms