RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 SNAPC2Q13487 334 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 ATG16L1Q676U5 607 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 C1orf228Q6PIY5 440 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 PDIK1LQ8N165 341 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 POU5F2Q8N7G0 328 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 IRGQQ8WZA9 623 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 ZNF516Q92618 1163 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 BTBD9Q96Q07 612 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 GCNAQ96QF7 691 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 IQCGQ9H095 443 aaKnown RBP17.27■□□□□ 0.36
TSKU-205ENST00000612930 TMEM165Q9HC07 324 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 C1orf112Q9NSG2 853 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 UBAP1Q9NZ09 502 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 ZHX2Q9Y6X8 837 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 ZNF335Q9H4Z2 1342 aaPredicted RBP17.27■□□□□ 0.36
TSKU-205ENST00000612930 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 KAT6AQ92794 2004 aa17.27■□□□□ 0.36
TSKU-205ENST00000612930 TMEM191CA6NGB0 347 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 KBTBD13C9JR72 458 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 CASQ2O14958 399 aaPredicted RBP17.27■□□□□ 0.35
TSKU-205ENST00000612930 CLPTM1O96005 669 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 TMEM191BP0C7N4 346 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 RAG1P15918 1043 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 SCNN1DP51172 638 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 DYNLT1P63172 113 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 OTUD4Q01804 1114 aaKnown RBP17.27■□□□□ 0.35
TSKU-205ENST00000612930 OGDHQ02218 1023 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 SULT2A1Q06520 285 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 SLC39A4Q6P5W5 647 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 HIPK4Q8NE63 616 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 ZFP28Q8NHY6 868 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 ACTL9Q8TC94 416 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 GMCL1Q96IK5 515 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 KIFC3Q9BVG8 833 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 PARVAQ9NVD7 372 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 PKD2L1Q9P0L9 805 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 TBX20Q9UMR3 447 aa17.27■□□□□ 0.35
TSKU-205ENST00000612930 ACO1P21399 889 aaKnown RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 MAGEA10P43363 369 aaPredicted RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 SPOPLQ6IQ16 392 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 CRLF3Q8IUI8 442 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 MARVELD2Q8N4S9 558 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 GAB3Q8WWW8 586 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 FBXL18Q96ME1 805 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 A0A0B4J269 797 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 CAPN8A6NHC0 703 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 TTLL13PA6NNM8 815 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 H3BNX3 289 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 SNNO75324 88 aaPredicted RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 ADARP55265 1226 aaKnown RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 BTKQ06187 659 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 SFSWAPQ12872 951 aaKnown RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 TUBB3Q13509 450 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 DBN1Q16643 649 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 MYLK3Q32MK0 819 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 ICA1LQ8NDH6 482 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 CCDC124Q96CT7 223 aaKnown RBP17.26■□□□□ 0.35
TSKU-205ENST00000612930 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 LZTS1Q9Y250 596 aa17.26■□□□□ 0.35
TSKU-205ENST00000612930 CCDC160A6NGH7 325 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 ZC3H11AO75152 810 aaKnown RBP eCLIP17.25■□□□□ 0.35
TSKU-205ENST00000612930 C1QAP02745 245 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 PCSK6P29122 969 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 FDFT1P37268 417 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 LMBRD2Q68DH5 695 aaPredicted RBP17.25■□□□□ 0.35
TSKU-205ENST00000612930 DENND5BQ6ZUT9 1274 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 NUDCD3Q8IVD9 361 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 UNC45BQ8IWX7 931 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 ABTB1Q969K4 478 aaPredicted RBP17.25■□□□□ 0.35
TSKU-205ENST00000612930 MAD1L1Q9Y6D9 718 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 C3orf70A6NLC5 250 aaPredicted RBP17.25■□□□□ 0.35
TSKU-205ENST00000612930 DENRO43583 198 aaKnown RBP17.25■□□□□ 0.35
TSKU-205ENST00000612930 PEX1O43933 1283 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
TSKU-205ENST00000612930 WEE2P0C1S8 567 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 GALK1P51570 392 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 NRLP54845 237 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 TTC39BQ5VTQ0 682 aaPredicted RBP17.25■□□□□ 0.35
TSKU-205ENST00000612930 TRIM72Q6ZMU5 477 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 C15orf39Q6ZRI6 1047 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 EFCAB3Q8N7B9 438 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 JADE3Q92613 823 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 POMPQ9Y244 141 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 SSX2IPQ9Y2D8 614 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 INPP5FQ9Y2H2 1132 aa17.25■□□□□ 0.35
TSKU-205ENST00000612930 SF3B1O75533 1304 aaKnown RBP eCLIP17.25■□□□□ 0.35
TSKU-205ENST00000612930 ATP5BP06576 529 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms