RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MIS12Q9H081 205 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ACSS3Q9H6R3 686 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 NOP56O00567 594 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 TOM1L1O75674 476 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 BAG2O95816 211 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 NFICP08651 508 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 PTPN4P29074 926 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ARL2P36404 184 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 GMPSP49915 693 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 CLDN10P78369 228 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ZNF200P98182 395 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 SLC25A11Q02978 314 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 LAMTOR4Q0VGL1 99 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 TNFAIP1Q13829 316 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ZNF667Q5HYK9 610 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 CASC4Q6P4E1 433 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 UNC5BQ8IZJ1 945 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 HIPK4Q8NE63 616 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 RDM1Q8NG50 284 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 DCAKDQ8WVC6 231 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 PGLYRP2Q96PD5 576 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 MRPL4Q9BYD3 311 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 PCMTD2Q9NV79 361 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 IL1RAPL1Q9NZN1 696 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 SLC24A2Q9UI40 661 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 RBBP6Q7Z6E9 1792 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 COPEO14579 308 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ZWINTO95229 277 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 TNNC2P02585 160 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 PDGFRAP16234 1089 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ALDH18A1P54886 795 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 THOC5Q13769 683 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 KRT81Q14533 505 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 GJC2Q5T442 439 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 PEBP4Q96S96 227 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 LPIN3Q9BQK8 851 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 SDCBP2Q9H190 292 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 FAM49BQ9NUQ9 324 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 SENP1Q9P0U3 644 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 DRG1Q9Y295 367 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 SYNJ2BP-COX16A0A087WUM0 186 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 DPPA5A6NC42 116 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 POLR2BP30876 1174 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 ROR1Q01973 937 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 BANPQ8N9N5 519 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 AGBL3Q8NEM8 1001 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 CDHR1Q96JP9 859 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 DDX50Q9BQ39 737 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 NRBP2Q9NSY0 501 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 DDX56Q9NY93 547 aaKnown RBP14.67□□□□□ -0.06
COL6A1-207ENST00000612273 COX16Q9P0S2 106 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 WASF2Q9Y6W5 498 aa14.67□□□□□ -0.06
COL6A1-207ENST00000612273 SPDYE5A6NIY4 337 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 C3orf70A6NLC5 250 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MAFGO15525 162 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 KRT7P08729 469 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 RBL1P28749 1068 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 GRIA1P42261 906 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 ASPAP45381 313 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 SLC8A3P57103 927 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 AMHR2Q16671 573 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 ACSBG2Q5FVE4 666 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 CCDC62Q6P9F0 684 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 ISLR2Q6UXK2 745 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 DNAJC9Q8WXX5 260 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 CPB2Q96IY4 423 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 TTC1Q99614 292 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MINDY3Q9H8M7 445 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 DLGAP2Q9P1A6 1054 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MEI4A8MW99 385 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 B2RBV5 119 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 C2CD2LO14523 706 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 FCHO1O14526 889 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 OGTO15294 1046 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MAP3K13O43283 966 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MSCO60682 206 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 KLHL38Q2WGJ6 581 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 FKBP1CQ5VVH2 108 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 C16orf46Q6P387 395 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 ADGRD1Q6QNK2 874 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 CEP128Q6ZU80 1094 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 STMN2Q93045 179 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 SRPK1Q96SB4 655 aaKnown RBP14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MMP19Q99542 508 aa14.66□□□□□ -0.06
COL6A1-207ENST00000612273 MAGEB2O15479 319 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 LGR5O75473 907 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 SERPINB4P48594 390 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ZNF132P52740 706 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ATXN1P54253 815 aaKnown RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 SLC45A4Q5BKX6 768 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 THEMIS2Q5TEJ8 643 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 SNX30Q5VWJ9 437 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ANO7Q6IWH7 933 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 TRMT10BQ6PF06 316 aaKnown RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 TDRPQ86YL5 185 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 WDR49Q8IV35 697 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms