RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 TIMM44O43615 452 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 TCF7P36402 384 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 MYL6P60660 151 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 NPY5RQ15761 445 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 LINC00523Q86TU6 105 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 ABCC6O95255 1503 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 TOMM70O94826 608 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 CBX6O95503 412 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 STX5Q13190 355 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 QPCTQ16769 361 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 ANO4Q32M45 955 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 SIK2Q9H0K1 926 aa11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
CDC42EP3-206ENST00000611976 TSHRP16473 764 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 PAX7P23759 505 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 RXRBP28702 533 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SSTR1P30872 391 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ATICP31939 592 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 MARCKSL1P49006 195 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 KCNJ2P63252 427 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 EVX2Q03828 476 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZNF268Q14587 947 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 PDK4Q16654 411 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ERAP1Q9NZ08 941 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 hCG_2014768A0A024R1R8 64 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZBTB39O15060 712 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 WFS1O76024 890 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZCCHC18P0CG32 403 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 RALBP11234 206 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ADRA1DP25100 572 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 RPA3P35244 121 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 FLT3P36888 993 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 FKBP1AP62942 108 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 FMO1Q01740 532 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 LAMB3Q13751 1172 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 BNC2Q6ZN30 1099 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 KAT5Q92993 513 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAR2Q96K12 515 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SALL4Q9UJQ4 1053 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SOX13Q9UN79 622 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 OPLAHO14841 1288 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 TGFB1I1O43294 461 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 MYL3P08590 195 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 RIPK1Q13546 671 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ACAP1Q15027 740 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SV2CQ496J9 727 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 NAIF1Q69YI7 327 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAM172AQ8WUF8 416 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 PRPF31Q8WWY3 499 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 TBCBQ99426 244 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 TAL1P17542 331 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 EIF4BP23588 611 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SPOUT1Q5T280 376 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 ALG3Q92685 438 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 EFCAB1Q9HAE3 211 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 TBC1D23Q9NUY8 699 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 THAP1Q9NVV9 213 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 KCNK4Q9NYG8 393 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 TOPAZ1Q8N9V7 1692 aa11.31□□□□□ -0.6
CDC42EP3-206ENST00000611976 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 STRNO43815 780 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 PDPK2PQ6A1A2 396 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 LRRC40Q9H9A6 602 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 DPP3Q9NY33 737 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 APOC4-APOC2K7ER74 178 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 LIASO43766 372 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC25A27O95847 323 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 APOC2P02655 101 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 GFAPP14136 432 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms