RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 BEX3Q00994 111 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 GLB1LQ6UWU2 654 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 TLK2Q86UE8 772 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 IQCKQ8N0W5 287 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 ATP6V1E2Q96A05 226 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 ZNF669Q96BR6 464 aaPredicted RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 PABPC5Q96DU9 382 aaKnown RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 PRAMEP78395 509 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 KLC3Q6P597 504 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 MREGQ8N565 214 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 ARMC2Q8NEN0 867 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 CEP41Q9BYV8 373 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 CASTOR2A6NHX0 329 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 PTK6Q13882 451 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 ICE2Q659A1 982 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 PLPPR4Q7Z2D5 763 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 STAMBPL1Q96FJ0 436 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 IFT43Q96FT9 208 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 L3MBTL3Q96JM7 780 aaPredicted RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 GTSE1Q9NYZ3 720 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 STX1BP61266 288 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 KDSRQ06136 332 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 BST2Q10589 180 aaKnown RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 SH2D4BQ5SQS7 431 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 ATPAF2Q8N5M1 289 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 GPR20Q99678 358 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 SHOC2Q9UQ13 582 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 MROH7Q68CQ1 1323 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 MYH7P12883 1935 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 NUMBP49757 651 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 SKOR1P84550 965 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 FASTKD1Q53R41 847 aaKnown RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 SLFN11Q7Z7L1 901 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 SLC2A14Q8TDB8 520 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 PPP1R36Q96LQ0 422 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 KRT82Q9NSB4 513 aa13.67□□□□□ -0.22
TCF3-220ENST00000611869 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
TCF3-220ENST00000611869 HMGCRP04035 888 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 CYP2F1P24903 491 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 STX3Q13277 289 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 RASGEF1CQ8N431 466 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 MSL3Q8N5Y2 521 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 C7orf43Q8WVR3 580 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 APOL2Q9BQE5 337 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 TINF2Q9BSI4 451 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 MYH14Q7Z406 1995 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 PPFIA2O75334 1257 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 THP07101 528 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 ELK3P41970 407 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 NOVP48745 357 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 ALDH18A1P54886 795 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 ART3Q13508 389 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 PCSK7Q16549 785 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 PHF13Q86YI8 300 aaPredicted RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 IPMKQ8NFU5 416 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 PGM2Q96G03 612 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 NEUROG2Q9H2A3 272 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 LRRC19Q9H756 370 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 ITGB4P16144 1822 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 FSCN2O14926 492 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 C4BPAP04003 597 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 CCDC130P13994 396 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 ADIGQ0VDE8 80 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 SLITRK1Q96PX8 696 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 TRIM62Q9BVG3 475 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 FRMD8P1Q9BZ68 369 aaPredicted RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 MANSC1Q9H8J5 431 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 KIF9Q9HAQ2 790 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 XAB2Q9HCS7 855 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 PIH1D1Q9NWS0 290 aaKnown RBP13.66□□□□□ -0.22
TCF3-220ENST00000611869 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 RPS6KL1Q9Y6S9 549 aa13.66□□□□□ -0.22
TCF3-220ENST00000611869 AKAP11Q9UKA4 1901 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 PIAS1O75925 651 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 ZWINTO95229 277 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 ARF4P18085 180 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 KDELR1P24390 212 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 CHKAP35790 457 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 TKTL1P51854 596 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 MFSD10Q14728 455 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 DBN1Q16643 649 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 TTC39BQ5VTQ0 682 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 ADAM32Q8TC27 787 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 WWP1Q9H0M0 922 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 TAF1P21675 1872 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms