RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SFMBT2Q5VUG0 894 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 VSTM1Q6UX27 236 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 GBP6Q6ZN66 633 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 GRASPQ7Z6J2 395 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-217ENST00000611848 ITIH5Q86UX2 942 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 ADHFE1Q8IWW8 467 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 CRYBG2Q8N1P7 616 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 TXLNBQ8N3L3 684 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 LEMD2Q8NC56 503 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 B3GALNT2Q8NCR0 500 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 MSANTD4Q8NCY6 345 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 TRIM58Q8NG06 486 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 LMO3Q8TAP4 145 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 SECISBP2LQ93073 1101 aaKnown RBP9.35□□□□□ -0.91
SMAD4-217ENST00000611848 MYLPFQ96A32 169 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 SEPT5Q99719 369 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-217ENST00000611848 NT5C1AQ9BXI3 368 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 DEF6Q9H4E7 631 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-217ENST00000611848 CDH22Q9UJ99 828 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 NR2E1Q9Y466 385 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 DUSP10Q9Y6W6 482 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 CLUHO75153 1309 aa9.35□□□□□ -0.91
SMAD4-217ENST00000611848 CTAGE15A4D2H0 777 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CILPO75339 1184 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ATP1A1P05023 1023 aaKnown RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CTAGE8P0CG41 777 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CYP2F1P24903 491 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PON1P27169 355 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 MAGEA11P43364 429 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 RPL10AP62906 217 aaKnown RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 VEPH1Q14D04 833 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 EXOC3L4Q17RC7 722 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PABPC1LQ4VXU2 614 aaKnown RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 MDH1BQ5I0G3 518 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 KLHDC7AQ5VTJ3 777 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 OTOP3Q7RTS5 596 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CTAGE6Q86UF2 777 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CTAGE4Q8IX94 777 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 FEZF2Q8TBJ5 459 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PSMG2Q969U7 264 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PCED1BQ96HM7 432 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 FAM81BQ96LP2 452 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CEP295NLQ96MC4 621 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 UHRF1Q96T88 793 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CRACR2AQ9BSW2 395 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PARD6BQ9BYG5 372 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 EPC1Q9H2F5 836 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 DPEP3Q9H4B8 488 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ANKZF1Q9H8Y5 726 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 NLRC4Q9NPP4 1024 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CISHQ9NSE2 258 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 GCNT4Q9P109 453 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 DNMT3BQ9UBC3 853 aaKnown RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 RAB21Q9UL25 225 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 SAR1BQ9Y6B6 198 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ATP8B3O60423 1300 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 GREB1Q4ZG55 1949 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CUL9Q8IWT3 2517 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 LOC730098B7Z3J9 87 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ZNF197O14709 1029 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 TRIM66O15016 1216 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 RHOP08100 348 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PRLRP16471 622 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CD58P19256 250 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 MAGEA1P43355 309 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 EPHA5P54756 1037 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CBX1P83916 185 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 GCNT1Q02742 428 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ZP2Q05996 745 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 BRD3Q15059 726 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CYP4A22Q5TCH4 519 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 PPM1KQ8N3J5 372 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 RNF10Q8N5U6 811 aaKnown RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 TTC9BQ8N6N2 239 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ACSF2Q96CM8 615 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 RPGRIP1Q96KN7 1286 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ARID3AQ99856 593 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 CORO1BQ9BR76 489 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ELOVL4Q9GZR5 314 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 INTS2Q9H0H0 1204 aaKnown RBP9.34□□□□□ -0.91
SMAD4-217ENST00000611848 SIX2Q9NPC8 291 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ASAH2Q9NR71 780 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.34□□□□□ -0.912e-6■■■■■ 30.8
SMAD4-217ENST00000611848 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
SMAD4-217ENST00000611848 ZNF638Q14966 1978 aaKnown RBP9.34□□□□□ -0.92
SMAD4-217ENST00000611848 C5orf42Q9H799 3197 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 A0A0C4DFX4 3053 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 MACROD2A1Z1Q3 448 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 CCDC151A5D8V7 595 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 ENC1O14682 589 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 SOAT2O75908 522 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 MICAL2O94851 1124 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms