RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 CNGA3Q16281 694 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 DDX42Q86XP3 938 aaKnown RBP eCLIP16.2■□□□□ 0.18
TNXB-208ENST00000611016 SERPINB12Q96P63 405 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 ERP44Q9BS26 406 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 XPNPEP3Q9NQH7 507 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 GIMAP4Q9NUV9 329 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 TMEM161AQ9NX61 479 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 TIMM13Q9Y5L4 95 aaPredicted RBP16.2■□□□□ 0.18
TNXB-208ENST00000611016 ENO3P13929 434 aaPredicted RBP16.2■□□□□ 0.18
TNXB-208ENST00000611016 CD44P16070 742 aaKnown RBP16.2■□□□□ 0.18
TNXB-208ENST00000611016 WEE1P30291 646 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 TOB1P50616 345 aaPredicted RBP16.2■□□□□ 0.18
TNXB-208ENST00000611016 MFSD10Q14728 455 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 APLFQ8IW19 511 aaPredicted RBP16.2■□□□□ 0.18
TNXB-208ENST00000611016 SH2D3CQ8N5H7 860 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 ZNF518BQ9C0D4 1074 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 BRD8Q9H0E9 1235 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 TMEM39AQ9NV64 488 aa16.2■□□□□ 0.18
TNXB-208ENST00000611016 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 TGFB3P10600 412 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 SOX11P35716 441 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 CCDC126Q96EE4 140 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 ZMAT2Q96NC0 199 aaKnown RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 EPB42P16452 691 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 ALDH5A1P51649 535 aaPredicted RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 CCDC157Q569K6 752 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 AARS2Q5JTZ9 985 aaKnown RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 TLK2Q86UE8 772 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 RNASEH1O60930 286 aaKnown RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 AKAP5P24588 427 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 ERFP50548 548 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 MTA1Q13330 715 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 CDCA5Q96FF9 252 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 TRMT6Q9UJA5 497 aaKnown RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 VPS28Q9UK41 221 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 AKR1A1P14550 325 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 HLA-DPA1P20036 260 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 TGM2P21980 687 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 POU4F1Q01851 419 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 HIST2H2ACQ16777 129 aaPredicted RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 HIST2H2AA3Q6FI13 130 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 TRIM69Q86WT6 500 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 SLC13A5Q86YT5 568 aaPredicted RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 CISHQ9NSE2 258 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 VIL1P09327 827 aaKnown RBP16.19■□□□□ 0.18
TNXB-208ENST00000611016 CCND1P24385 295 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 PTPN7P35236 360 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 TAS1R2Q8TE23 839 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 ZSWIM1Q9BR11 485 aa16.19■□□□□ 0.18
TNXB-208ENST00000611016 SOAT1P35610 550 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 IFNEQ86WN2 208 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 ENGASEQ8NFI3 743 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 TMC2Q8TDI7 906 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 WWOXQ9NZC7 414 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 FBXO21O94952 628 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 GHRP10912 638 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 PDK2Q15119 407 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 TIGD7Q6NT04 549 aaPredicted RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 BBS7Q8IWZ6 715 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 NMRK1Q9NWW6 199 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 KANSL3Q9P2N6 904 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 IPPQ9Y573 584 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 TRIM17Q9Y577 477 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DCCP43146 1447 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 CNTNAP2Q9UHC6 1331 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 GEMIN4P57678 1058 aaKnown RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 TTLL9Q3SXZ7 439 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 CENPPQ6IPU0 288 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 HERC6Q8IVU3 1022 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 ZNF513Q8N8E2 541 aaPredicted RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 SGF29Q96ES7 293 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 AAR2Q9Y312 384 aaKnown RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 MST1RQ04912 1400 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 A0A1B0GW55 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 RHOCP08134 193 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4L2P0CJ85 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4L3P0CJ86 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4L4P0CJ87 422 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4L5P0CJ88 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4L6P0CJ89 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4L7P0CJ90 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 PSMA3P25788 255 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 DUX4Q9UBX2 424 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 KIF1CO43896 1103 aaKnown RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 SOAT2O75908 522 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 HOXC6P09630 235 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 ANXA11P50995 505 aaKnown RBP16.18■□□□□ 0.18
TNXB-208ENST00000611016 TKTL1P51854 596 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 MYBPC2Q14324 1141 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 FAM131BQ86XD5 332 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
TNXB-208ENST00000611016 SOCS4Q8WXH5 440 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms