RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CYP4V2Q6ZWL3 525 aaPredicted RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 CENPTQ96BT3 561 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 APBA2Q99767 749 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 SLC4A5Q9BY07 1137 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 INTS9Q9NV88 658 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 TBK1Q9UHD2 729 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 GOLGA8MH3BSY2 632 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 MCF2LO15068 1137 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 PAPSS1O43252 624 aaPredicted RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 XPOTO43592 962 aaKnown RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 SETSIPP0DME0 302 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 CCDC130P13994 396 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 LMO2P25791 158 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 ADORA2BP29275 332 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 ATP5DP30049 168 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 SDC4P31431 198 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 EIF3EP60228 445 aaKnown RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 FASTKD3Q14CZ7 662 aaKnown RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 UBXN11Q5T124 520 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 ZNF618Q5T7W0 954 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 TWF2Q6IBS0 349 aaKnown RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 TMEM110Q86TL2 294 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 TAB3Q8N5C8 712 aaPredicted RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 SPATA18Q8TC71 538 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 FAM172AQ8WUF8 416 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 CCDC77Q9BR77 488 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 IPPQ9Y573 584 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 RBP3P10745 1247 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 FGFR1P11362 822 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 GNAT1P11488 350 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 CTCFP49711 727 aaPredicted RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 PURAQ00577 322 aaKnown RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 SOX4Q06945 474 aaPredicted RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 KRT81Q14533 505 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 ZBED8Q8IZ13 594 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 APPL2Q8NEU8 664 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 ATXN2LQ8WWM7 1075 aaKnown RBP14.25□□□□□ -0.13
NEK3-205ENST00000610828 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 SHOC2Q9UQ13 582 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 Q9Y3F1 56 aa14.25□□□□□ -0.13
NEK3-205ENST00000610828 FOXO6A8MYZ6 492 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 NDC80O14777 642 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 TCEA3O75764 348 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 TAF6P49848 677 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 SNX16P57768 344 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 DPYSL3Q14195 570 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 STAT4Q14765 748 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 QPCTQ16769 361 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 ARHGAP17Q68EM7 881 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 NPNTQ6UXI9 565 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 CPLX4Q7Z7G2 160 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 PCGF5Q86SE9 256 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 FAM71DQ8N9W8 422 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 SOCS4Q8WXH5 440 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 PRCCQ92733 491 aaPredicted RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 SNX25Q9H3E2 840 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 GPATCH2LQ9NWQ4 482 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 TRIM66O15016 1216 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 CDH16O75309 829 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 GABBR2O75899 941 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 KCNE1P15382 129 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 CREB1P16220 341 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 DESP17661 470 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 PNPLA4P41247 253 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 BST2Q10589 180 aaKnown RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 PDCD11Q14690 1871 aaKnown RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 CAPN12Q6ZSI9 719 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 CENPUQ71F23 418 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 ZC3H18Q86VM9 953 aaKnown RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 MAP7D3Q8IWC1 876 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 C10orf67Q8IYJ2 551 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 NME8Q8N427 588 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 ARRDC4Q8NCT1 418 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 SMG8Q8ND04 991 aaKnown RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 CLEC4CQ8WTT0 213 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 P3H4Q92791 437 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 KHSRPQ92945 711 aaKnown RBP eCLIP14.24□□□□□ -0.136e-7■■□□□ 14.4
NEK3-205ENST00000610828 CHMP6Q96FZ7 201 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 TTC25Q96NG3 672 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 PRMT1Q99873 361 aaKnown RBP14.24□□□□□ -0.13
NEK3-205ENST00000610828 BRCA2P51587 3418 aa14.24□□□□□ -0.13
NEK3-205ENST00000610828 CEP350Q5VT06 3117 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 A0A087WUV0 522 aaPredicted RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 EXOC1LA0A1B0GW35 172 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 ENDOD1O94919 500 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 ABHD2P08910 425 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 LCP1P13796 627 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 RPL22P35268 128 aaKnown RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 IFNAR2P48551 515 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 BCAT1P54687 386 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms