RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 IFNL1Q8IU54 200 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 ZDHHC17Q8IUH5 632 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 KBTBD7Q8WVZ9 684 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 RAB6CQ9H0N0 254 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 STAU2Q9NUL3 570 aaKnown RBP eCLIP29.36■■■□□ 2.29
CSPG5-205ENST00000610462 MYO1CO00159 1063 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 CDH6P55285 790 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 STAT4Q14765 748 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 CDO1Q16878 200 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 SPATS2Q86XZ4 545 aaKnown RBP29.35■■■□□ 2.29
CSPG5-205ENST00000610462 CRYBG2Q8N1P7 616 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 C7orf31Q8N865 590 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 KHSRPQ92945 711 aaKnown RBP eCLIP29.35■■■□□ 2.29
CSPG5-205ENST00000610462 CFAP57Q96MR6 1250 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 CCDC77Q9BR77 488 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 IPPQ9Y573 584 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 GABBR2O75899 941 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 CCDC142Q17RM4 750 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 RSAD2Q8WXG1 361 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 TTC25Q96NG3 672 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 LPIN3Q9BQK8 851 aa29.35■■■□□ 2.29
CSPG5-205ENST00000610462 MAK16Q9BXY0 300 aaKnown RBP29.35■■■□□ 2.29
CSPG5-205ENST00000610462 SPTLC1O15269 473 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 PAPSS1O43252 624 aaPredicted RBP29.34■■■□□ 2.29
CSPG5-205ENST00000610462 FGFR1P11362 822 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 GNL1P36915 607 aaPredicted RBP29.34■■■□□ 2.29
CSPG5-205ENST00000610462 TAF6P49848 677 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 GDF10P55107 478 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 EIF3EP60228 445 aaKnown RBP29.34■■■□□ 2.29
CSPG5-205ENST00000610462 CCDC38Q502W7 563 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 SCUBE3Q8IX30 993 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 SMG8Q8ND04 991 aaKnown RBP29.34■■■□□ 2.29
CSPG5-205ENST00000610462 ATXN2LQ8WWM7 1075 aaKnown RBP29.34■■■□□ 2.29
CSPG5-205ENST00000610462 PRCCQ92733 491 aaPredicted RBP29.34■■■□□ 2.29
CSPG5-205ENST00000610462 FAM107BQ9H098 131 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 C10orf88Q9H8K7 445 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 LGALS13Q9UHV8 139 aa29.34■■■□□ 2.29
CSPG5-205ENST00000610462 HCRTO43612 131 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 MMRN1Q13201 1228 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 DPYSL3Q14195 570 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 BOLA3Q53S33 107 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 ARHGEF2Q92974 986 aaKnown RBP29.33■■■□□ 2.29
CSPG5-205ENST00000610462 FARP1Q9Y4F1 1045 aaPredicted RBP29.33■■■□□ 2.29
CSPG5-205ENST00000610462 TNPO2O14787 897 aaKnown RBP29.33■■■□□ 2.29
CSPG5-205ENST00000610462 MCF2LO15068 1137 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 PDGFRBP09619 1106 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 SDC4P31431 198 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 ATP11AP98196 1134 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 SOX4Q06945 474 aaPredicted RBP29.33■■■□□ 2.29
CSPG5-205ENST00000610462 BST2Q10589 180 aaKnown RBP29.33■■■□□ 2.29
CSPG5-205ENST00000610462 TFDP2Q14188 446 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 SV2CQ496J9 727 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 LIMS2Q7Z4I7 341 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 ANKRD52Q8NB46 1076 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 TEKT4Q8WW24 435 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 SNX25Q9H3E2 840 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 FAM169AQ9Y6X4 670 aa29.33■■■□□ 2.29
CSPG5-205ENST00000610462 A0A087WUV0 522 aaPredicted RBP29.32■■■□□ 2.28
CSPG5-205ENST00000610462 AKR1A1P14550 325 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 PDK2Q15119 407 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 FAM47CQ5HY64 1035 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 CYP4F22Q6NT55 531 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 RGMBQ6NW40 437 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 APPL2Q8NEU8 664 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 FAM172AQ8WUF8 416 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 NCAPGQ9BPX3 1015 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 DNAI2Q9GZS0 605 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 ZFYVE28Q9HCC9 887 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 INTS9Q9NV88 658 aaKnown RBP29.32■■■□□ 2.28
CSPG5-205ENST00000610462 CTNNAL1Q9UBT7 734 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 CCDC130P13994 396 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 DESP17661 470 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 RPL22P35268 128 aaKnown RBP29.32■■■□□ 2.28
CSPG5-205ENST00000610462 CTCFP49711 727 aaPredicted RBP29.32■■■□□ 2.28
CSPG5-205ENST00000610462 BCAT1P54687 386 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 MAP7D3Q8IWC1 876 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 UNC45BQ8IWX7 931 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 PPIL6Q8IXY8 311 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 GOLGA2P5Q9HBQ8 144 aa29.32■■■□□ 2.28
CSPG5-205ENST00000610462 NGRNQ9NPE2 291 aaKnown RBP29.32■■■□□ 2.28
CSPG5-205ENST00000610462 DCAF8L1A6NGE4 600 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 ALOX15BO15296 676 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 CDH16O75309 829 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 LMO2P25791 158 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 CORO7P57737 925 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 KRT81Q14533 505 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 CENPUQ71F23 418 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 FAM228AQ86W67 206 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 ARRDC4Q8NCT1 418 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 SPATA18Q8TC71 538 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 RNF157Q96PX1 679 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 B3GNT5Q9BYG0 378 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 NMRK2Q9NPI5 230 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 CYLDQ9NQC7 956 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 GGA2Q9UJY4 613 aa29.31■■■□□ 2.28
CSPG5-205ENST00000610462 C5orf60A6NFR6 353 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 RBP3P10745 1247 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 ADORA2BP29275 332 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 RDXP35241 583 aaKnown RBP29.3■■■□□ 2.28
CSPG5-205ENST00000610462 RPL34P49207 117 aaKnown RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms