RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 USP43Q70EL4 1123 aa4□□□□□ -1.77
CCDC144B-206ENST00000609959 CELF5Q8N6W0 485 aaKnown RBP4□□□□□ -1.77
CCDC144B-206ENST00000609959 TRMOQ9BU70 441 aa4□□□□□ -1.77
CCDC144B-206ENST00000609959 GTPBP4Q9BZE4 634 aaKnown RBP4□□□□□ -1.77
CCDC144B-206ENST00000609959 FAM234AQ9H0X4 552 aa4□□□□□ -1.77
CCDC144B-206ENST00000609959 GABRQQ9UN88 632 aa4□□□□□ -1.77
CCDC144B-206ENST00000609959 H3BUI4 141 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 DTNBO60941 627 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 SNUPNO95149 360 aaKnown RBP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 HOXD9P28356 352 aaPredicted RBP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 SRSF1Q07955 248 aaKnown RBP eCLIP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 UBAP2Q5T6F2 1119 aaKnown RBP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 RGS7BPQ6MZT1 257 aaPredicted RBP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 COLCA1Q6ZS62 124 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 ANKRD13BQ86YJ7 626 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 ARFGAP1Q8N6T3 406 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 RBMXL3Q8N7X1 1067 aaKnown RBP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 MPLKIPQ8TAP9 179 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 ZNF398Q8TD17 642 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 SOCS4Q8WXH5 440 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 LENG8Q96PV6 779 aaPredicted RBP3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 SPEF1Q9Y4P9 236 aa3.99□□□□□ -1.77
CCDC144B-206ENST00000609959 TCRBV5S1A1TA0A578 114 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 TLR2O60603 784 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 UNC5CO95185 931 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 IL33O95760 270 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 SOX8P57073 446 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 ZNF628Q5EBL2 1059 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 TMEM240Q5SV17 173 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 SFTPA1Q8IWL2 248 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 FAM167AQ96KS9 214 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 TRMT13Q9NUP7 481 aaKnown RBP3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 MAFFQ9ULX9 164 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 PCDHA6Q9UN73 950 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 SHOC2Q9UQ13 582 aa3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 TRIP12Q14669 1992 aaPredicted RBP3.98□□□□□ -1.77
CCDC144B-206ENST00000609959 hCG_1984214I3L0E3 225 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 LRPAP1P30533 357 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 PDE6CP51160 858 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 RPS13P62277 151 aaKnown RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 RHDQ02161 417 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 CCDC157Q569K6 752 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 BRDTQ58F21 947 aaPredicted RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 EMC10Q5UCC4 262 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 SLC15A3Q8IY34 581 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 SIRT6Q8N6T7 355 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 PLBD2Q8NHP8 589 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 BRIX1Q8TDN6 353 aaKnown RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 HSPBAP1Q96EW2 488 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 MVB12AQ96EY5 273 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 SLC35A4Q96G79 324 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 ZFYVE19Q96K21 471 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 SLCO5A1Q9H2Y9 848 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 PCDH12Q9NPG4 1184 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 HEY2Q9UBP5 337 aa3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 NDRG4Q9ULP0 352 aaKnown RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 MRPS17Q9Y2R5 130 aaKnown RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 LUC7L2Q9Y383 392 aaKnown RBP3.97□□□□□ -1.77
CCDC144B-206ENST00000609959 LACTBL1A8MY62 500 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 ERC2O15083 957 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 TOMM40O96008 361 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 ALDH2P05091 517 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 GRPP07492 148 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 KHDC1LQ5JSQ8 128 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 DENND2CQ68D51 928 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 ZNF549Q6P9A3 640 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 PIP4P1Q86T03 277 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 ZNF280BQ86YH2 543 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 DCP1BQ8IZD4 617 aaKnown RBP3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 OSCP1Q8WVF1 389 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 MAP4K1Q92918 833 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 PPP1R10Q96QC0 940 aaKnown RBP3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 ARMT1Q9H993 441 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 TMEM184CQ9NVA4 438 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 XPR1Q9UBH6 696 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 AMFRQ9UKV5 643 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 PLEKHM1Q9Y4G2 1056 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 COL4A3BPQ9Y5P4 624 aa3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCDC144B-206ENST00000609959 GTPBP1O00178 669 aaKnown RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 AP4M1O00189 453 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 PSMD9O00233 223 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 CNOT3O75175 753 aaKnown RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 KRT10P13645 584 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 AKAP5P24588 427 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 CDC25AP30304 524 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 SUMO2P61956 95 aaKnown RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 E2F1Q01094 437 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 RNASE12Q5GAN4 147 aaKnown RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 BCDIN3DQ7Z5W3 292 aaKnown RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 CAND1Q86VP6 1230 aaKnown RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 LIX1LQ8IVB5 337 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 C16orf71Q8IYS4 520 aaPredicted RBP3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 HPS3Q969F9 1004 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 RSPRY1Q96DX4 576 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 MMS19Q96T76 1030 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 CGRRF1Q99675 332 aa3.95□□□□□ -1.78
CCDC144B-206ENST00000609959 ZPBPQ9BS86 351 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms