RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 ADH5P11766 374 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 ENGP17813 658 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 HOXD12P35452 270 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 SIM1P81133 766 aaPredicted RBP16.86■□□□□ 0.29
HDDC2-210ENST00000609574 GRIN1Q05586 938 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 KCNA1Q09470 495 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 COL9A2Q14055 689 aaPredicted RBP16.86■□□□□ 0.29
HDDC2-210ENST00000609574 DUOXA1Q1HG43 343 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 SDE2Q6IQ49 451 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 KIAA1211LQ6NV74 962 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 TMEM92Q6UXU6 159 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 CCDC73Q6ZRK6 1079 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 KCNV2Q8TDN2 545 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 EPSTI1Q96J88 318 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 GTPBP2Q9BX10 602 aaKnown RBP16.86■□□□□ 0.29
HDDC2-210ENST00000609574 STRA6Q9BX79 667 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 KIAA1586Q9HCI6 787 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 OLFML3Q9NRN5 406 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 INTS13Q9NVM9 706 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 SMPD4Q9NXE4 827 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 CFAP97Q9P2B7 532 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 SLC6A14Q9UN76 642 aa16.86■□□□□ 0.29
HDDC2-210ENST00000609574 TCRBV21S2A2A0A5A6 115 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 WARSP23381 471 aaKnown RBP16.85■□□□□ 0.29
HDDC2-210ENST00000609574 LMO2P25791 158 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 SLC6A11P48066 632 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 NOP14P78316 857 aaKnown RBP16.85■□□□□ 0.29
HDDC2-210ENST00000609574 GAD2Q05329 585 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 HNRNPDQ14103 355 aaKnown RBP16.85■□□□□ 0.29
HDDC2-210ENST00000609574 MDH1BQ5I0G3 518 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 SLC23A3Q6PIS1 610 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 IL17RCQ8NAC3 791 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 PDZD8Q8NEN9 1154 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 OR6B3Q8NGW1 331 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 OTUB2Q96DC9 234 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 C8orf48Q96LL4 319 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 TTLL2Q9BWV7 592 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 PANK4Q9NVE7 773 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 SIX4Q9UIU6 781 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 WASF3Q9UPY6 502 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 SH3BP1Q9Y3L3 701 aa16.85■□□□□ 0.29
HDDC2-210ENST00000609574 TSC2P49815 1807 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 A0A0A0MRY4 1105 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 SRRM3A6NNA2 597 aaPredicted RBP16.84■□□□□ 0.29
HDDC2-210ENST00000609574 SGK1O00141 431 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 HCRTO43612 131 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 OPHN1O60890 802 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 RTN3O95197 1032 aaPredicted RBP16.84■□□□□ 0.29
HDDC2-210ENST00000609574 SYPP08247 313 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 WNT7BP56706 349 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 USP46P62068 366 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 RPL6Q02878 288 aaKnown RBP16.84■□□□□ 0.29
HDDC2-210ENST00000609574 KDSRQ06136 332 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 TAF10Q12962 218 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 RHBDF2Q6PJF5 856 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 GATA6Q92908 595 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 PCED1BQ96HM7 432 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 FNBP1Q96RU3 617 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 CBWD1Q9BRT8 395 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 LRRC27Q9C0I9 530 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 ELOVL4Q9GZR5 314 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 NACA2Q9H009 215 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 RNF38Q9H0F5 515 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
HDDC2-210ENST00000609574 CRTAC1Q9NQ79 661 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 DEC1Q9P2X7 70 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 MSRB2Q9Y3D2 182 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 TCHHQ07283 1943 aa16.84■□□□□ 0.29
HDDC2-210ENST00000609574 E2F8A0AVK6 867 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 UPK3BL1B0FP48 263 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 UPK3BL2E5RIL1 263 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 F8VP50 259 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 HYAL3O43820 417 aaPredicted RBP16.83■□□□□ 0.28
HDDC2-210ENST00000609574 ATP8B3O60423 1300 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 TOP3BO95985 862 aaKnown RBP16.83■□□□□ 0.28
HDDC2-210ENST00000609574 YWHAQP27348 245 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 STAT6P42226 847 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 PTGER3P43115 390 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 TNNC1P63316 161 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 IFRD2Q12894 506 aaPredicted RBP16.83■□□□□ 0.28
HDDC2-210ENST00000609574 CCDC142Q17RM4 750 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 ABCA7Q8IZY2 2146 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 NUP93Q8N1F7 819 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 ZSWIM2Q8NEG5 633 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 KBTBD7Q8WVZ9 684 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 PILRBQ9UKJ0 227 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 PCDHB9Q9Y5E1 797 aa16.83■□□□□ 0.28
HDDC2-210ENST00000609574 SRPRBQ9Y5M8 271 aaKnown RBP16.83■□□□□ 0.28
HDDC2-210ENST00000609574 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
HDDC2-210ENST00000609574 ZNF217O75362 1048 aa16.82■□□□□ 0.28
HDDC2-210ENST00000609574 CLSTN1O94985 981 aa16.82■□□□□ 0.28
HDDC2-210ENST00000609574 SERPINF2P08697 491 aa16.82■□□□□ 0.28
HDDC2-210ENST00000609574 PTPN1P18031 435 aaKnown RBP16.82■□□□□ 0.28
HDDC2-210ENST00000609574 TNNI1P19237 187 aa16.82■□□□□ 0.28
HDDC2-210ENST00000609574 ITPKAP23677 461 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms